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. 2010 Apr 14;48(6):2147–2153. doi: 10.1128/JCM.00459-10

TABLE 1.

Results of histopathology, PCR (DNA extracted with Takara Dexpat), and DNA sequence analysis of 51 FFPE human tissues

Sample Tissue site (type of specimen) Clinical diagnosis Histopathology (GMS)a PCR resultsb
Result of sequencing
HKG ITS3-4
1 Lung Aspergillosis Sparse + + Aspergillus flavus
2 Lung Blastomycosis Abundant + + B. dermatitidis
3 Sinus Aspergillosis Sparse
4 Prostate Aspergillosis Medium + + A. flavus
5 Unknown Zygomycosis/Aspergillosis Sparse + + Aspergillus niger
6 Nasal cartilage Zygomycosis Sparse
7 Sinus Aspergillosis Medium + + Aspergillus fumigatus
8 Sinus Aspergillosis Abundant + + A. fumigatus
9 Nasal septum Aspergillosis Abundant
10 Orbital tissue Aspergillosis Abundant + + A. niger
11 Turbinate Aspergillosis Abundant + + A. flavus
12 Sinus Aspergillosis Sparse
13 Sinus Aspergillosis Abundant + + A. flavus
14 Colon Histoplasmosis Abundant + + H. capsulatum
15 Unknown Aspergillosis Abundant + + A. flavus
16 Unknown Aspergillosis Abundant + + A. flavus
17 Lung Blastomycosis Abundant + + B. dermatitidis
18 Bone marrow Histoplasmosis Abundant + + H. capsulatum
19 Bone marrow Histoplasmosis Abundant + + H. capsulatum
20 Bone marrow Histoplasmosis Abundant + + H. capsulatum
21 Bone marrow Histoplasmosis Abundant + + H. capsulatum
22 Bone marrow Histoplasmosis Abundant + + H. capsulatum
23 Lung Aspergillosis Sparse
24 Cardiac muscle Zygomycosis Sparse
25 Nasal Aspergillosis Medium + + A. flavus
26 Skin Zygomycosis Abundant + + Apophysomyces elegans
27 Colon Aspergillosis Abundant + + A. fumigatus
28 Colon Aspergillosis Abundant + + A. fumigatus
29 Lung Histoplasmosis Abundant + + H. capsulatum
30 Skin Zygomycosis Medium +
31 Lung Zygomycosis Abundant + + Rhizopus oryzae/Amylomyces rouxii
32 Lung Zygomycosis Sparse +
33 Kidney Zygomycosis Abundant + + Rhizopus oryzae/A. rouxii
34 Lung Zygomycosis Sparse + + R. oryzae/R. microsporus/R. azygosporus
35 Lung Aspergillosis Sparse +
36 Lung Aspergillosis Sparse +
37 Kidney Aspergillosis Medium +
38 Unknown Zygomycosis Sparse + + R. oryzae/A. rouxii
39 Unknown Zygomycosis Sparse + + R. oryzae/A. rouxii
40 Unknown Zygomycosis Sparse + + Saksenaea vasiformis
41 Nasal Zygomycosis Medium + + C. echinulata/C. septata
42 Forearm Zygomycosis. Medium + + R. oryzae/R. azygosporus/R. microsporus
43 Lung Zygomycosis Sparse + + R. microsporus/R. azygosporus
44 Abdominal Zygomycosis Medium + + R. oryzae/A. rouxii
45 Lung Zygomycosis Sparse +
46 Skin Zygomycosis Abundant + + R. microsporus/R. azygosporus
47 Spleen Zygomycosis Medium + + R.s oryzae/A. rouxii
48 Skin Zygomycosis Medium + + R. oryzae/A. rouxii
49 Axilla Zygomycosis Medium + + R. oryzae/A. rouxii
50 Eye Histoplasmosis Abundant + + H. capsulatum
51 Lung Aspergillosis Medium + + A. fumigatus
a

Fungal structures are reported as abundant, medium and sparse.

b

HKG, housekeeping gene (human β-globin gene). +, positive; −, negative.