Fig. 5.

The structures of MSV subgenomics are often complex. Examples of subgenomic sequences are presented along with their full-length parental genomes. Discrete sequence elements are presented on different lines with dotted grey lines indicating the order in which they were arranged and thick black arrows indicating their orientation. MatMPCPVW- and VWMPCPMat-derived sequences are given in red and blue, respectively; the MSV-Gre subgenomic from a natural maize infection is shown in grey. Sequence elements too short to identify are in green. The length of elements shorter than 50 bp are given. Genome regions (above) are labelled as in Fig. 1.