Table 2.
UCSNP-43, UCSNP-19 and UCSNP-63 Allele and Genotype Distribution
| SNP | Allele/Genotype | Patients (917) | Controls (748) | P 1 |
|---|---|---|---|---|
| UCSNP-43 | MAF2 (A) | 0.088 | 0.101 | 0.359 |
| G/G | 759 (0.828) | 602 (0.805) | ||
| G/A | 155 (0.178) | 141 (0.189) | 0.343 | |
| A/A | 3 (0.003) | 5 (0.007) | ||
| UCSNP-19 | MAF (2R) | 0.464 | 0.404 | 0.007 |
| 3R/3R | 247 (0.269) | 258 (0.345) | ||
| 3R/2R | 489 (0.533) | 376 (0.503) | 0.001 | |
| 2R/2R | 181 (0.197) | 114 (0.152) | ||
| UCSNP-63 | MAF (T) | 0.162 | 0.170 | 0.673 |
| C/C | 638 (0.696) | 513 (0.686) | ||
| C/T | 261 (0.285) | 216 (0.289) | 0.704 | |
| T/T | 18 (0.020) | 19 (0.025) |
1. Pearson chi square test
2. MAF = minor allele frequency.