Table 3. Acropora digitifera pairwise population F ST via AMOVA values estimated among sites in the Nansei Islands.
| Region | T | A | A | A | O | O | O | K | K | M | M | I | I | S | S | S | S | S | S |
| Site | SMY | KSN | NON | MEY | OHD | MED | UKA | MJN | SNS | IRB | YSN | UGN | HRK | SMJ | OGT | KRS | TKT | KYM | ASP |
| SMY | |||||||||||||||||||
| KSN | 0.011 | ||||||||||||||||||
| NON | 0.006 | 0.006 | |||||||||||||||||
| MEY | 0.012 | 0.003 | 0.002 | ||||||||||||||||
| OHD | 0.033 | 0.022 | 0.007 | 0.015 | |||||||||||||||
| MED | 0.000 | −0.006 | −0.001 | 0.003 | 0.022 | ||||||||||||||
| UKA | 0.001 | 0.002 | −0.004 | −0.001 | 0.017 | −0.007 | |||||||||||||
| MJN | 0.023 | −0.001 | 0.002 | −0.002 | 0.017 | −0.005 | 0.000 | ||||||||||||
| SNS | 0.014 | 0.002 | 0.007 | −0.001 | 0.024 | −0.006 | 0.001 | −0.006 | |||||||||||
| IRB | 0.020 | 0.018 | 0.008 | 0.010 | 0.018 | 0.010 | 0.010 | 0.010 | 0.014 | ||||||||||
| YSN | 0.012 | −0.001 | 0.003 | 0.000 | 0.019 | −0.005 | 0.000 | 0.003 | 0.001 | 0.015 | |||||||||
| UGN | 0.023 | 0.017 | 0.013 | 0.003 | 0.008 | 0.021 | 0.011 | 0.015 | 0.023 | 0.023 | 0.013 | ||||||||
| HRK | 0.014 | 0.020 | 0.007 | 0.011 | 0.009 | 0.012 | 0.003 | 0.014 | 0.018 | 0.015 | 0.015 | 0.007 | |||||||
| SMJ | 0.006 | 0.006 | 0.002 | −0.002 | 0.013 | 0.001 | 0.000 | 0.009 | 0.007 | 0.010 | −0.002 | 0.002 | 0.008 | ||||||
| OGT | 0.019 | 0.016 | 0.010 | 0.010 | 0.008 | 0.010 | 0.006 | 0.008 | 0.015 | 0.019 | 0.016 | 0.017 | 0.009 | 0.014 | |||||
| KRS | 0.029 | 0.018 | 0.005 | 0.005 | 0.006 | 0.016 | 0.011 | 0.009 | 0.019 | 0.006 | 0.015 | 0.007 | 0.009 | 0.006 | 0.010 | ||||
| TKT | 0.002 | 0.008 | 0.011 | 0.008 | 0.016 | 0.002 | 0.003 | 0.009 | 0.006 | 0.010 | 0.008 | 0.018 | 0.013 | 0.004 | 0.005 | 0.016 | |||
| KYM | 0.013 | 0.009 | 0.002 | 0.005 | 0.004 | 0.000 | −0.001 | 0.008 | 0.007 | 0.005 | 0.002 | 0.007 | 0.003 | −0.003 | 0.002 | 0.001 | 0.001 | ||
| ASP | 0.005 | 0.010 | 0.002 | −0.001 | 0.010 | 0.001 | 0.004 | 0.004 | 0.002 | 0.005 | −0.001 | 0.007 | 0.008 | −0.006 | 0.011 | 0.001 | 0.005 | −0.004 |
Statistical significance was calculated, and probability values based on 999 permutations are shown. Statistical significance levels for all pairwise tests were p<0.05 after adjusting for multiple comparisons using a FDR correction following [44]. Values in italics are significant. A letter in regions suggests the first letter of sampling region; T: Tanega-shima, A: Amami, O: Okinawa, K: Kerama, M: Miyako, I: Ishigaki, S: Sekisei Reef. Furthermore, pairwise F ST via AMOVA were also calculated from the allele data adjusted by MICROCHECKER (Ver. 2.2.3; [30]) (Table S2).