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. 2010 Jul;24(7):2334–2346. doi: 10.1096/fj.09-147991

TABLE 1.

Oligodeoxynucleotides used for incision and AP-endonuclease assays

Name Sequence
8-OxoG 5′-ATATACCGCG(OG)CCGGCCGATCAAGCTTATT-3′
3′-TATATGGCGC C GGCCGGCTAGTTCGAATAA-5′
Uracil 5′-ATATACCGCGGUCGGCCGATCAAGCTTATT-3′
3′-TATATGGCGCCGGCCGGCTAGTTCGAATAA-5′
5-OH-U 5′-ATATACCGCGG(OH-U)CGGCCGATCAAGCTTATT-3′
3′-TATATGGCGCC G GCCGGCTAGTTCGAATAA-5′
5-OH-U bubble 5′-GCTTAGCTTGGAATCGTATCATGTA(OU)ACTCGTGTGCCGTGTAGACCGTGCC-3′
3′-CGAATCGAACCTTAGCATAGGCACCCGACAAACACGGCACATCTGGCACGG-5′
8-oxoG bubble 5′-GCTTAGCTTGGAATCGTATCATGTA(OG)ACTCGTGTGCCGTGTAGACCGTGCC-3′
3′-CGAATCGAACCTTAGCATAGGCACCCGACAAACACGGCACATCTGGCACGG-5′
THF (AP-site analogue) 5′-ATATACCGCGG(THF)CGGCCGATCAAGCTTATT-3′
3′-TATATGGCGCCGGCCGGCTAGTTCGAATAA-5′