Table 6.
WNT2 SNPs genotype frequencies in each population
| SNP | Genotype | Schizophrenia | Control | Europe | China | Japan | Sub-Saharan African |
|---|---|---|---|---|---|---|---|
| rs39315 | A/A | 0.31 | 0.26 | 0.36 | 0.29 | 0.46 | 0.22 |
| 5'-near gene | A/G | 0.48 | 0.49 | 0.41 | 0.62 | 0.43 | 0.44 |
| G/G | 0.21 | 0.25 | 0.22 | 0.09 | 0.11 | 0.34 | |
| P value | 0.285 | 0.010 | 0.003 | 0.373 | |||
| rs17132543 | A/A | 0.34 | 0.32 | 0.78 | 0.24 | 0.44 | 0.97 |
| Iintron4 | A/G | 0.48 | 0.48 | 0.22 | 0.58 | 0.47 | 0.03 |
| G/G | 0.18 | 0.20 | 0.00 | 0.18 | 0.09 | 0.00 | |
| P value | 0.000 | 0.334 | 0.048 | 0.000 | |||
| rs3779548 | A/A | 0.44 | 0.44 | 0.30 | 0.69 | 0.36 | 0.17 |
| Intron4 | A/G | 0.44 | 0.45 | 0.47 | 0.22 | 0.44 | 0.65 |
| G/G | 0.11 | 0.11 | 0.23 | 0.09 | 0.20 | 0.18 | |
| P value | 0.031 | 0.001 | 0.180 | 0.000 | |||
| rs733154 | A/A | 0.59 | 0.58 | 0.85 | 0.62 | 0.31 | |
| Intron4 | A/G | 0.36 | 0.36 | No data | 0.13 | 0.31 | 0.37 |
| G/G | 0.05 | 0.06 | 0.03 | 0.08 | 0.33 | ||
| P value | N/A | 0.000 | 0.675 | 0.000 | |||
| rs1051751 | G/G | 1.00 | 1.00 | 1.00 | 1.00 | 0.98 | 1.00 |
| Exon 5 | G/T | 0.00 | 0.00 | 0.00 | 0.00 | 0.02 | 0.00 |
| Cys294Phe | T/T | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |
| P value | N/A | N/A | N/A | N/A | |||
| rs2024233 | A/A | 0.30 | 0.28 | 0.50 | 0.29 | 0.34 | 0.54 |
| 3'-UTR | A/G | 0.51 | 0.51 | 0.40 | 0.44 | 0.50 | 0.41 |
| G/G | 0.18 | 0.21 | 0.10 | 0.27 | 0.16 | 0.05 | |
| P value | 0.003 | 0.526 | 0.531 | 0.000 | |||
| rs4730775 | G/G | 0.61 | 0.60 | 0.37 | 0.71 | 0.62 | 0.46 |
| 3'-near gene | G/A | 0.33 | 0.37 | 0.36 | 0.27 | 0.29 | 0.45 |
| A/A | 0.06 | 0.03 | 0.27 | 0.02 | 0.09 | 0.09 | |
| P value | 0.000 | 0.261 | 0.135 | 0.060 | |||
| rs6948009 | A/A | 0.74 | 0.53 | 0.95 | 0.93 | ||
| 3'-near gene | A/G | 0.25 | 0.45 | No data | 0.05 | 0.05 | No data |
| G/G | 0.01 | 0.02 | 0.00 | 0.02 | |||
| P value | N/A | 0.000 | 0.000 | N/A | |||
From database http://www.ncbi.nlm.nih.gov/sites/entrez?db=snp. We estimated all p-values via comparisons between the control group of our sample and each population. N/A, not applicable.