Table 1. Summary of the clustering performance and bioinformatic analyses performed on the nucleotide sequences encoded in the transcriptome of the adult stage of each Clonorchis sinensis and Opisthorchis viverrini.
| cDNA libraries | ||
| Initial clustering | Clonorchis sinensis | Opisthorchis viverrini |
| Sequences before clustering | 574,448 | 642,918 |
| (351±141; 1–727)a | (373±133; 1–724) | |
| Proportion of sequences incorporated into clusters | 83.96% (482,325)b | 84.19% (541,264) |
| Contigs | 42,179 | 60,833 |
| (711±483; 42–11,947) | (680±438; 41–9,753) | |
| Singletons | 92,123 | 101,654 |
| (279±161; 40–727) | (307±162; 40–724) | |
| Total unique sequences after assembly | 134,302 | 162,487 |
| (415±363; 40–11,947) | (447±348; 40–9,753) | |
| Coverage (average reads per assembled contig) | 10.8±20.0 | 8.6±14.5 |
| Containing an open reading frame (ORF) | 88,714 (66.1%) | 107,217 (66.0%) |
a
Summarized as number of sequences (average sequence length ± standard deviation; minimum and maximum sequence lengths).
b
Summarized as number of sequences (proportion of total sequences used for the analysis).