Table 3.
BLAST results for plant genes. Genes hypothesized to be important in the colonization and adaptation of land plants (Graham et al. 2000).
| Gene name | Tair Num. | P. patens | C. reinhartii | C. orbicularis | S. pratensis | |||||
|---|---|---|---|---|---|---|---|---|---|---|
| Hits | e-value | Hits | e-value | Hits | e-value | Hits | e-value | |||
| Cellulosic cell wall | RSW1 | AT4G32410 | 19 | 0.0 | - | - | 2 | e-130 | 5 | 0.0 |
| Cytokinetic phragmoplast | GEM1/MOR1 | AT2G35630 | 2 | 0.0 | 1 | 0.0 | 2 | e-51 | 1 | 2e-70 |
| Plasmodesmata | CRT1 | AT1G56340 | 6 | e-62 | 1 | e-125 | 5 | e-141 | 3 | 3e-53 |
| asymmetric cell division | WUSCHEL | AT1G20700 | 2 | e-32 | - | - | 2 | e-33 | 0 | |
| asymmetric cell division | GNOM | AT1G13980 | 7 | 0.0 | 3 | e-108 | 1 | 7e-49 | 0 | |
| Specialized cells | Alpha Expansions | AT1G12560 | 39 | e-70 | - | - | 0 | 12 | 3e-53 | |
| Specialized cells | Beta Expansoins | AT1G65680 | 4 | 7e-44 | - | - | 0 | 2 | 1e-24 | |
| Multicellular sporophyte body | MERISTEM LAYER1 | AT4G21750 | - | - | - | - | 1 | e-106 | 1 | 6e-53 |
| Ploidy level influence in tissue differentiation | MADS domain | AT1G22130 | 10 | e-22 | - | - | 0 | 0 | ||
CDSs of noted genes were BLASTed against protein databases of two reference genomes, Physcomitrella patens and Chlamydomonas reinhartii, and our two charophytes, Coleochaete orbicularis and Spirogyra pratensis. Only BLASTx hits below e-20 are reported.