Skip to main content
. 2010 Jun 5;2:33. doi: 10.1186/1758-5996-2-33

Table 3.

Sequence alignment of the loop domain linking β2 to α2 of YiiP and representative members of the cation diffusion facilitator family.

CDF homologs Amino acid sequence Residue number
◀----β2---▶ ◀-L3-▶ ◀----- α2 --------
YiiP PTRFIQIHLE MEDSLP LVQAHMVADQVEQAI 286
CzrB PRSFLEFHLV VRGDTP VEEAHRLCDELERAL 269
ZitB EKPVMTLHVQ VI---P PHDHDALLDQIQHYL 275
CzcD GKASLTVHVV NDTA-- VNPEMEVLPELKQML 273
msZnT-8 NQVILSVHVA TA---A SQDSQSVRTGIAQAL 337
hmZnT-2 AQPVLSVHIA IAQN-- -TDAQAVLKTASSRL 293
hmZnT-3 TYHVASAHLA IDST-- -ADPEAVLAEASSRL 357
hmZnT-8 NQVILSAHVA TA---A SRDSQVVRREIAKAL 339

The human ZnT-8 residue R325 is in boldface. YiiP and ZitB are bacterial CDF homologs from Escherichia coli, CzcD from Ralstonia metallidurans, CzrB from Thermus thermophilus, msZnT-8 from Mus musculus (mouse), and ZnT-2, ZnT-3, and ZnT-8 from Homo Sapiens.