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. Author manuscript; available in PMC: 2011 Sep 1.
Published in final edited form as: Mol Psychiatry. 2010 Mar 2;16(3):321–332. doi: 10.1038/mp.2010.14

Table 4.

Number of alternate outcome associations (p<.05) to genomewide significant SNPs, by metabolic phenotype

Weight Gain Lipids Glucose Blood Pressure




SNP Gene Genomewide q-value BMI Hips Waist W/H TChol Trig HDL Gluc A1c Dia Sys HR
rs1568679 MEIS2 0.004 1 1* 1* 0 0 0 0 1 0 1 1 0
rs11954387 GPR98 0.012 0 0 0 0 0 0 1 1 1* 0 0 1
rs1967256 GPR98 0.012 0 0 0 0 0 0 1 1 1* 0 0 1
rs13224682 PRKAR2B 0.015 1 1 1 0 0 2* 0 1 0 0 1 0
rs17651157 FHOD3 0.016 0 0 0 0 0 1* 0 0 0 0 0 0
rs6735179 no 0.018 1 0 1 1 0 1* 0 0 0 0 0 0
rs10502661 FHOD3 0.021 0 0 0 0 0 1* 0 0 0 0 0 0
rs6741819 RNF144A 0.029 0 0 1 1 1 1* 1 0 2 0 1 0
rs4838255 ASTN2 0.031 0 0 0 1 0 1* 0 0 0 1 1 0
rs1405687 no 0.038 2 1* 1 0 0 0 0 0 0 2 0 0
rs2994684 no 0.041 1 2 2 0 0 2* 1 0 0 0 0 0
rs7105881 no 0.052 1 1* 1 0 0 0 1 0 0 1 1 0
rs1117324 no 0.054 1 1* 1 0 0 0 0 0 0 0 0 0
rs1464500 SOX5 0.058 0 0 0 0 0 1 1* 0 0 0 0 0
rs7108821 no 0.063 1 1* 1 0 0 0 0 0 0 1 1 0
rs7119817 no 0.067 1 1* 1 0 0 0 1 0 0 1 1 0
rs10202231 no 0.068 0 0 1 0 0 2* 0 0 0 0 0 0
rs17100498 no 0.078 1 0 0 1 0 0 0 1 1* 0 0 0
rs1771628 no 0.082 1 2 3 0 0 2* 1 1 1 0 0 0
rs13335336 ATF7IP2 0.1 0 1 0 0 0 0 0 0 1* 0 0 0
rs17216786 CDH13 0.133 1 1 1 1 0 1* 1 1 0 0 0 1
rs153091 LOC729993 0.135 0 0 0 0 0 1* 0 0 0 0 0 0
rs9658108 PPARD 0.191 1 1 1 0 0 1 0 1* 0 0 0 0
rs1187614 CLMN 0.23 1 0 1 0 1* 0 0 0 0 0 0 0
rs620875 KIRREL3 0.236 2 2 1 1 0 1* 0 1 1 0 0 0

Genomewide significant finding marked with asterisk.