Table 1.
Most significant SNP associations detected by case/control analysis.
| Marker name | Chr | Marker position (bp) | MAF (cases) | MAF (controls) | Chi-square value | P-value |
|---|---|---|---|---|---|---|
| BTB-01162852 | 4 | 115,699,819 | 1 | 0 | 32.00 | 1.54E-08 |
| ARS-BFGL-NGS-24470 | 4 | 115,725,375 | 1 | 0.05556 | 28.21 | 1.09E-07 |
| ARS-BFGL-NGS-43056 | 4 | 116,685,970 | 1 | 0.05556 | 28.21 | 1.09E-07 |
| ARS-BFGL-NGS-80140 | 4 | 117,048,104 | 1 | 0.05556 | 28.21 | 1.09E-07 |
| ARS-BFGL-NGS-108296 | 4 | 119,189,609 | 1 | 0.05556 | 28.21 | 1.09E-07 |
| ARS-BFGL-NGS-95252 | 4 | 119,272,013 | 1 | 0.05556 | 28.21 | 1.09E-07 |
"Chr" indicates the Bos taurus chromosome (BTA) number. "MAF" denotes the minor allele frequency, and is individually reported for case (affected) individuals and control (normal) individuals. The chi-square is the result of a basic allele test, with one degree of freedom (df). P-value is the asymptotic p-value for the basic allele test.