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. 2010 May 9;61(11):2905–2921. doi: 10.1093/jxb/erq113

Table 1.

Most abundant classes of ESTs from developmental senescence and stress-treated libraries

Contig No. of clones Source library Putative function Nearest match e-value
Developmental libraries
Contig 175 102 S0S1 Metallothionein-like protein AY833008 7E-24
Contig 172 49 S0S1 Large subunit rRNA DQ008809 1E-73
Contig 180 40 S2S4 Metallothionein type II AF039003 9E-27
Contig 19 30 S0S1 Metallothionein type II AF039003 9E-27
Contig 239 19 S0S1 Metallothionein type II AF147786 4E-23
Contig 252 19 S2S4 Metallothionein type II AF039003 2E-28
Contig 35 19 S2S4 Metallothionein-like protein AF279655 3E-30
Contig 158 17 SSH0-2 Putative cell wall P8 protein AC146631 0.0009
Contig 203 16 S0S1 Cytochrome b6/f complex subunit VIII BAF64867 0.001
Contig 198 15 S0S1 Ubiquitin carrier-like protein DQ294271 1E-101
Contig 150 13 SSH0-2 GSDL-motif lipase AY491975 6E-62
Contig 242 13 S2S4 Metallothionein type I AF039002 1E-22
Contig 214 11 S0S1 40S ribosomal protein S17 (RPS17D) AT5G04800 3E-64
Contig 128 10 SSH2-45 Dihydroflavonol-4-reductase AY374471 1E-54
Contig 221 10 S2S4 Large subunit rRNA gene DQ008808 0
Contig 45 10 SSH2-0 Aldehyde decarbonylase (epicuticular wax associated) ATHCER1 2E-56
Stress libraries
Contig 175 48 COLD Metallothionein-like protein AY833008 7E-24
Contig 172 22 COLD Large subunit rRNA DQ008809 1E-73
Contig 19 15 COLD Metallothionein type II AF039003 9E-27
Contig 242 12 COLD Metallothionein type I AF039002 1E-22
Contig 263 12 COLD Arabidopsis unknown protein/CXE carboxylesterase AT1G47480 0
Contig 180 9 COLD Metallothionein type II AF039003 9E-27
Contig 186 5 COLD No significant BLAST match
Contig 187 4 COLD Elongation factor-1 alpha 2
Contig 239 4 COLD Metallothionein-like protein (ML2) AF147786 4E-23
Contig 252 4 COLD Metallothionein type II AF039003 2E-28
Contig 154 3 COLD Ubiquitin precursor-like EU249995 E-116
Contig 193 3 COLD Glutathione transferase AJ441055 4E-72
Contig 35 3 COLD Metallothionein-like protein AF279655 3E-30

Petal libraries: S0S1, S2S4 are non-subtracted libraries from combined stages S0 and S2, and S2 and S4 respectively; SSH0-2 and SSH2-45 are subtracted libraries of stage S2 from S0 and combined stages S4 and S5 from S2, respectively; COLD library combined a 3 d cold treatment followed by a 3 h or 24 h refreshment period (see Materials and methods for further details).