Table 1.
Contig | No. of clones | Source library | Putative function | Nearest match | e-value |
Developmental libraries | |||||
Contig 175 | 102 | S0S1 | Metallothionein-like protein | AY833008 | 7E-24 |
Contig 172 | 49 | S0S1 | Large subunit rRNA | DQ008809 | 1E-73 |
Contig 180 | 40 | S2S4 | Metallothionein type II | AF039003 | 9E-27 |
Contig 19 | 30 | S0S1 | Metallothionein type II | AF039003 | 9E-27 |
Contig 239 | 19 | S0S1 | Metallothionein type II | AF147786 | 4E-23 |
Contig 252 | 19 | S2S4 | Metallothionein type II | AF039003 | 2E-28 |
Contig 35 | 19 | S2S4 | Metallothionein-like protein | AF279655 | 3E-30 |
Contig 158 | 17 | SSH0-2 | Putative cell wall P8 protein | AC146631 | 0.0009 |
Contig 203 | 16 | S0S1 | Cytochrome b6/f complex subunit VIII | BAF64867 | 0.001 |
Contig 198 | 15 | S0S1 | Ubiquitin carrier-like protein | DQ294271 | 1E-101 |
Contig 150 | 13 | SSH0-2 | GSDL-motif lipase | AY491975 | 6E-62 |
Contig 242 | 13 | S2S4 | Metallothionein type I | AF039002 | 1E-22 |
Contig 214 | 11 | S0S1 | 40S ribosomal protein S17 (RPS17D) | AT5G04800 | 3E-64 |
Contig 128 | 10 | SSH2-45 | Dihydroflavonol-4-reductase | AY374471 | 1E-54 |
Contig 221 | 10 | S2S4 | Large subunit rRNA gene | DQ008808 | 0 |
Contig 45 | 10 | SSH2-0 | Aldehyde decarbonylase (epicuticular wax associated) | ATHCER1 | 2E-56 |
Stress libraries | |||||
Contig 175 | 48 | COLD | Metallothionein-like protein | AY833008 | 7E-24 |
Contig 172 | 22 | COLD | Large subunit rRNA | DQ008809 | 1E-73 |
Contig 19 | 15 | COLD | Metallothionein type II | AF039003 | 9E-27 |
Contig 242 | 12 | COLD | Metallothionein type I | AF039002 | 1E-22 |
Contig 263 | 12 | COLD | Arabidopsis unknown protein/CXE carboxylesterase | AT1G47480 | 0 |
Contig 180 | 9 | COLD | Metallothionein type II | AF039003 | 9E-27 |
Contig 186 | 5 | COLD | No significant BLAST match | ||
Contig 187 | 4 | COLD | Elongation factor-1 alpha 2 | ||
Contig 239 | 4 | COLD | Metallothionein-like protein (ML2) | AF147786 | 4E-23 |
Contig 252 | 4 | COLD | Metallothionein type II | AF039003 | 2E-28 |
Contig 154 | 3 | COLD | Ubiquitin precursor-like | EU249995 | E-116 |
Contig 193 | 3 | COLD | Glutathione transferase | AJ441055 | 4E-72 |
Contig 35 | 3 | COLD | Metallothionein-like protein | AF279655 | 3E-30 |
Petal libraries: S0S1, S2S4 are non-subtracted libraries from combined stages S0 and S2, and S2 and S4 respectively; SSH0-2 and SSH2-45 are subtracted libraries of stage S2 from S0 and combined stages S4 and S5 from S2, respectively; COLD library combined a 3 d cold treatment followed by a 3 h or 24 h refreshment period (see Materials and methods for further details).