Table 2.
Propensity of polar residues forming sidechain hydrogen bonds to mainchain atoms in various architectural contexts.
Propensity of polar residues forming sidechain hydrogen bonds to mainchain atoms | ||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino Acid | Within helix N-termini | Within helix C-termini | Within edge strands | From edge strands | Within central strands | From central strands | Within 310 helices | Within β-hairpins | Within polyproline helices | Within coil regions | ||||||||||
Con | All | Con | All | Con | All | Con | All | Con | All | Con | All | Con | All | Con | All | Con | All | Con | All | |
Arg | 1.05 | 0.46 | 14.38 | 6.44 | 3.17 | 3.29 | 1.71 | 3.25 | 0.34 | 1.73 | 3.07 | 3.42 | 3.02 | 3.52 | 1.48 | 2.69 | 6.11 | 3.70 | 2.48 | 3.52 |
Asn | 1.30 | 2.88 | 1.14 | 1.84 | 3.12 | 3.20 | 3.20 | 2.00 | 2.44 | 2.44 | 3.06 | 2.30 | 1.58 | 2.41 | 1.13 | 3.05 | 2.54 | 2.43 | 1.85 | 2.57 |
Asp | 4.84 | 3.04 | 0.61 | 0.54 | 2.65 | 1.20 | 2.27 | 2.06 | 0.97 | 1.44 | 2.42 | 1.46 | 3.04 | 2.28 | 6.37 | 2.97 | 1.74 | 1.43 | 5.20 | 2.52 |
Cys | 9.86 | 2.20 | 4.52 | 1.40 | 3.83 | 2.66 | 0.93 | 2.22 | 5.09 | 4.06 | 0.39 | 2.53 | 8.99 | 2.59 | 4.51 | 1.70 | 1.55 | 0.84 | 5.94 | 1.97 |
Gln | 0.11 | 1.22 | 0.44 | 1.80 | 2.33 | 2.98 | 6.19 | 2.23 | 4.87 | 1.86 | 1.67 | 2.10 | 0.96 | 1.69 | 1.04 | 1.80 | 1.55 | 3.06 | 0.52 | 1.96 |
Glu | 1.94 | 1.40 | 0.00 | 0.06 | 0.00 | 0.82 | 0.00 | 0.64 | 0.57 | 0.48 | 2.35 | 0.78 | 0.81 | 0.79 | 0.08 | 0.93 | 0.80 | 1.19 | 0.90 | 0.99 |
His | 2.37 | 1.13 | 0.89 | 2.50 | 0.97 | 2.24 | 4.08 | 2.14 | 0.82 | 2.08 | 1.81 | 2.22 | 1.45 | 2.62 | 1.90 | 1.89 | 4.71 | 2.38 | 2.66 | 2.08 |
Lys | 0.00 | 0.13 | 0.60 | 1.99 | 0.00 | 1.05 | 0.00 | 0.88 | 1.25 | 0.51 | 0.00 | 1.12 | 0.15 | 1.18 | 0.00 | 0.67 | 0.40 | 1.00 | 0.13 | 0.97 |
Ser | 1.53 | 3.43 | 0.65 | 2.15 | 0.47 | 1.92 | 2.61 | 2.01 | 2.32 | 3.22 | 2.46 | 1.75 | 1.09 | 2.01 | 3.58 | 2.23 | 0.76 | 2.03 | 0.90 | 1.95 |
Thr | 1.53 | 3.64 | 0.70 | 2.05 | 2.91 | 1.81 | 0.68 | 2.25 | 3.43 | 3.29 | 0.48 | 2.37 | 0.65 | 1.88 | 0.75 | 2.23 | 0.62 | 1.88 | 1.19 | 1.81 |
Trp | 0.81 | 0.23 | 0.36 | 1.28 | 2.06 | 1.31 | 6.53 | 2.01 | 1.84 | 1.83 | 1.84 | 1.83 | 3.41 | 1.23 | 3.88 | 1.40 | 2.93 | 1.25 | 3.58 | 1.30 |
Tyr | 1.06 | 0.68 | 0.56 | 1.23 | 4.04 | 1.77 | 0.30 | 2.37 | 1.03 | 1.26 | 3.14 | 2.37 | 4.20 | 1.37 | 0.07 | 0.91 | 3.12 | 1.84 | 1.60 | 1.39 |
Columns headed "Col" display the propensities of conserved buried polar residues.
Columns headed "All" display the propensities of all polar residues forming the indicated interaction (regardless of solvent accessibility or conservation).