Table 1.
The comparison with related studies
Adverse Event- Drug |
Drug Target Prediction |
Protein target- Toxicity |
PKI-Specific Input Data Size |
||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Literature | Physical Kinome |
Literature | Chemical Structure |
Compt. Prediction |
Evaluation | Kinome-wide Analysis |
Literature | Compt. Prediction |
Evaluation | Adverse Events(#) |
Kinase Inhibitors(#) |
Kinase targets(#) |
|
Studies Focusing on kinaes Toxicities | |||||||||||||
Present study | ▪ | ▪ | ▪ | ▪ | C,M | 71 | 20 | 266 | |||||
General Studies predicting target Toxicities (not focused on kinases) | |||||||||||||
Hansen 2009[9] | ▪ | ▪ | B | ▪ | 3 | 1* | - | ||||||
Bender A, et al. 2007[10] | ▪ | ▪ | ▪ | ▪ | 166 | - | 0* | ||||||
DART 2003[11] | ▪ | ▪ | ▪ | 187 | - | - | |||||||
Apic 2005 [12] | ▪ | ▪ | - | - | - | ||||||||
Studies predicting drug targets, but not their Toxicities | Not Applicable | ||||||||||||
Fliri 2007 [13] | ▪ | ▪ | C,B | 5,923 | 2* | 168* | |||||||
Garten 2009 [14] | ▪ | 395*(a) | 21*(b) | 121*(c) | |||||||||
Liebovitch 2007 [15] | ▪ | - | - | - | |||||||||
Campillos M, et al. 2008[16] | ▪ | ▪ | ▪ | B | 727 | 3* | - |
C=computational evaluation, B=biological validation, M= manual curation,
count,
: subset of gene targets with protein kinase activity (GO:0004672) or subset of drugs that are kinase inhibitors;
-: no specific detail about the input data
by searching the key words “side effect” in the Pharmspresso on line database (http://pharmspresso.stanford.edu/ygarten/Pharmspresso/html/index.html)
by searching the key words “human”, “kinase” and “Inhibitor” in the Pharmspresso on line database
by searching the key words “human” and “kinase” in the Pharmspresso on line database