Table 1.
Observed | MO/OO | Expected | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Ind. 1 | Ind. 2 | Cell Type |
I - SNPs |
Ind. 1 A- |
Ind. 1 B- |
Ind. 2 A- |
Ind. 2 B- |
P | ||||||
MO | OO | MO | OO | MO: (O–E)/I, % | ||||||||||
GM12096 | GM10849 | LBL | 7525 | 440 | 379 | 421 | 417 | 207 | 38 | 5.4 | 45.6 | 46.5 | 3.6 × 10-27 | 2.14 |
GM12097 | GM10849 | LBL | 5469 | 663 | 590 | 315 | 261 | 172 | 30 | 5.7 | 66.3 | 65.6 | 1.7 × 10-23 | 1.93 |
GM12099 | GM10848 | LBL | 9266 | 761 | 630 | 839 | 649 | 418 | 45 | 9.3 | 113.0 | 110.3 | 2.6 × 10-67 | 3.29 |
GM10848 | GM10849 | LBL | 8346 | 630 | 493 | 545 | 496 | 295 | 52 | 5.7 | 70.4 | 69.6 | 6.8 × 10-39 | 2.69 |
GM10848 | GM12698 | LBL | 8189 | 665 | 533 | 387 | 320 | 217 | 40 | 5.4 | 52.3 | 51.2 | 2.4 × 10-28 | 2.01 |
GM10848 | GM12699 | LBL | 7678 | 575 | 491 | 710 | 578 | 323 | 46 | 7.0 | 90.1 | 88.7 | 3.9 × 10-47 | 3.03 |
GM10848 | GM12706 | LBL | 9944 | 802 | 674 | 1234 | 1179 | 461 | 124 | 3.7 | 179.4 | 178.7 | 4.0 × 10-44 | 2.83 |
GM10849 | GM12698 | LBL | 7340 | 483 | 414 | 315 | 248 | 147 | 32 | 4.6 | 34.7 | 34.1 | 8.3 × 10-18 | 1.53 |
GM10849 | GM12699 | LBL | 7141 | 461 | 392 | 641 | 548 | 290 | 39 | 7.4 | 71.5 | 70.6 | 1.5 × 10-43 | 3.06 |
GM10849 | GM12706 | LBL | 9118 | 636 | 537 | 1044 | 1071 | 356 | 112 | 3.2 | 135.9 | 136.2 | 1.7 × 10-29 | 2.41 |
GM12698 | GM12699 | LBL | 7013 | 310 | 269 | 644 | 536 | 167 | 43 | 3.9 | 49.0 | 48.4 | 1.2 × 10-17 | 1.68 |
GM12089 | GM12706 | LBL | 9627 | 1136 | 859 | 1142 | 1116 | 439 | 173 | 2.5 | 234.3 | 233.6 | 5.8 × 10-27 | 2.13 |
PWBC1 | PWBC3 | WBC | 6713 | 155 | 203 | 102 | 147 | 69 | 15 | 4.6 | 6.8 | 6.5 | 3.8 × 10-09 | 0.93 |
PWBC2 | PWBC3 | WBC | 7405 | 101 | 138 | 124 | 174 | 67 | 16 | 4.2 | 4.9 | 4.7 | 2.2 × 10-08 | 0.84 |
Averages | 5.2 | 2.18 |
I = informative; Ind. = individual; MO = methylation overlap; O E = observed minus expected; OO = opposite overlap; SNP = single nucleotide polymorphism.
For the comparison of MO versus OO, the χ2 P values were calculated.