Table 3.
Predicted caspase cut sites of the human protein sequences downloaded from UniProtKB database.
| SVM-6-4 | RF-12-12 | J48-4-2 | Vote | |
|---|---|---|---|---|
| Predicted number of cut proteins | 70 343 | 73104 | 79 926 | 66 513 |
| % of all proteins (96 123) | 73,2 | 76,1 | 83,1 | 69,2 |
| Average number of cut sites per sequence | 4,3 | 4,8 | 5,9 | 3,7 |
| Predicted cut sites total | 301 678 | 348 600 | 468 865 | 246 692 |
| % of all possible cut sites (1 749 441) | 17,2 | 19,9 | 26,8 | 14,1 |
The cut sites were predicted with Pripper using Vote classification (RF-12-12 and SVM-6-4). The cut sites were predicted only from positions that had Asp (D) in the cut site; the given number of all possible cut sites is the number of Asp (D) residues in the protein sequences.