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. 2010 May 7;31(7):1259–1263. doi: 10.1093/carcin/bgq092

Table II.

Results of the pathway analyses

Pathway Number of genes Number of SNPs Nominal P-valuea Bonferroni P-value
Carcinogens /procarcinogens metabolism 71 201 0.0119 0.1663
DNA repair 51 133 0.2218 1.0000
Cell cycle control 48 166 0.0417 0.5832
Apoptosis 41 234 0.0004 0.0062
Inflammation 37 224 0.0725 1.0000
Cell growth 30 63 0.6744 1.0000
Cell signaling 28 83 0.5267 1.0000
Angiogenesis 15 145 0.2296 1.0000
Metastasis 15 18 0.4344 1.0000
Sex hormone signaling 11 65 0.0583 0.8160
Immunity 10 20 0.8972 1.0000
Molecular transport 8 16 0.2100 1.0000
DNA methylation 4 14 0.2667 1.0000
Telomere maintenance 1 5 0.0174 0.2432
a

Pathway-based analysis assessed by the logistic kernel machine regression adjusted for age and sex. Significant pathway effect after correcting for multiple comparisons is indicated in bold.