Table 1.
CNV regions identified in 197 DNA samples.
| CNV_ID | Start | Stop | Size | AA | CA | HCA | Combined CNV Frequency |
|---|---|---|---|---|---|---|---|
| chr1CNV1 | 12789177 | 12834675 | 45498 | 0.036 | 0.024 | 0.050 | 0.035 |
| chr1CNV2 | 94906770 | 94925850 | 19080 | 0.091 | 0.000 | 0.000 | 0.025 |
| chr1CNV3 | 105966892 | 106000090 | 33198 | 0.055 | 0.000 | 0.017 | 0.020 |
| chr1CNV4 | 147306690 | 147414362 | 107672 | 0.036 | 0.012 | 0.000 | 0.015 |
| chr1CNV5 | 187665261 | 187809352 | 144091 | 0.000 | 0.000 | 0.083 | 0.025 |
| chr1CNV6 | 195092486 | 195160949 | 68463 | 0.073 | 0.000 | 0.083 | 0.045 |
| chr1CNV7 | 243707190 | 243713984 | 6794 | 0.000 | 0.036 | 0.000 | 0.015 |
| chr2CNV8 | 41092376 | 41099005 | 6629 | 0.273 | 0.024 | 0.017 | 0.091 |
| chr2CNV9 | 57281457 | 57295357 | 13900 | 0.000 | 0.036 | 0.000 | 0.015 |
| chr2CNV10 | 89397452 | 89877778 | 480326 | 0.036 | 0.060 | 0.017 | 0.040 |
| chr2CNV11 | 110228954 | 110315618 | 86664 | 0.036 | 0.012 | 0.050 | 0.030 |
| chr2CNV12 | 184808081 | 184866619 | 58538 | 0.127 | 0.012 | 0.000 | 0.040 |
| chr2CNV13 | 242566407 | 242653950 | 87543 | 0.000 | 0.084 | 0.000 | 0.035 |
| chr3CNV14 | 6194326 | 6211038 | 16712 | 0.073 | 0.000 | 0.000 | 0.020 |
| chr3CNV15 | 53003415 | 53010084 | 6669 | 0.000 | 0.048 | 0.017 | 0.025 |
| chr3CNV16 | 65168286 | 65187636 | 19350 | 0.018 | 0.120 | 0.117 | 0.091 |
| chr3CNV17 | 75535790 | 75610832 | 75042 | 0.000 | 0.036 | 0.000 | 0.015 |
| chr3CNV18 | 101837214 | 101854561 | 17347 | 0.000 | 0.036 | 0.000 | 0.015 |
| chr3CNV19 | 152997395 | 153028291 | 30896 | 0.000 | 0.036 | 0.000 | 0.015 |
| chr3CNV20 | 163614102 | 163617940 | 3838 | 0.018 | 0.060 | 0.000 | 0.030 |
| chr3CNV21 | 163701543 | 163710564 | 9021 | 0.000 | 0.012 | 0.283 | 0.091 |
| chr3CNV22 | 166750382 | 166766442 | 16060 | 0.036 | 0.012 | 0.000 | 0.015 |
| chr3CNV23 | 177371924 | 177397828 | 25904 | 0.000 | 0.072 | 0.000 | 0.030 |
| chr3CNV24 | 189070613 | 189088009 | 17396 | 0.000 | 0.012 | 0.033 | 0.015 |
| chr3CNV25 | 192548615 | 192550982 | 2367 | 0.000 | 0.120 | 0.000 | 0.051 |
| chr4CNV26 | 64386888 | 64391664 | 4776 | 0.000 | 0.024 | 0.033 | 0.020 |
| chr4CNV27 | 64780488 | 64795145 | 14657 | 0.000 | 0.000 | 0.050 | 0.015 |
| chr4CNV28 | 88405746 | 88445557 | 39811 | 0.055 | 0.000 | 0.000 | 0.015 |
| chr4CNV29 | 104433739 | 104454829 | 21090 | 0.091 | 0.000 | 0.000 | 0.025 |
| chr4CNV30 | 161277505 | 161290832 | 13327 | 0.000 | 0.060 | 0.000 | 0.025 |
| chr4CNV31 | 162083578 | 162175279 | 91701 | 0.000 | 0.012 | 0.083 | 0.030 |
| chr5CNV32 | 9955403 | 9976731 | 21328 | 0.036 | 0.036 | 0.000 | 0.025 |
| chr5CNV33 | 97075236 | 97107276 | 32040 | 0.036 | 0.036 | 0.000 | 0.025 |
| chr5CNV34 | 117418457 | 117420311 | 1854 | 0.109 | 0.060 | 0.000 | 0.056 |
| chr5CNV35 | 120337992 | 120440119 | 102127 | 0.055 | 0.000 | 0.000 | 0.015 |
| chr5CNV36 | 160474752 | 160479606 | 4854 | 0.000 | 0.000 | 0.050 | 0.015 |
| chr2CNV37 | 67076651 | 67104015 | 27364 | 0.018 | 0.181 | 0.000 | 0.081 |
| chr6CNV38 | 79031111 | 79086086 | 54975 | 0.255 | 0.410 | 0.083 | 0.268 |
| chr6CNV39 | 93632051 | 93634213 | 2162 | 0.073 | 0.000 | 0.017 | 0.025 |
| chr6CNV40 | 167619368 | 167688151 | 68783 | 0.055 | 0.000 | 0.000 | 0.015 |
| chr7CNV41 | 64334979 | 64553672 | 218693 | 0.000 | 0.024 | 0.033 | 0.020 |
| chr7CNV42 | 76038186 | 76394983 | 356797 | 0.073 | 0.036 | 0.033 | 0.045 |
| chr7CNV43 | 81761377 | 81761849 | 472 | 0.000 | 0.000 | 0.050 | 0.015 |
| chr7CNV44 | 89187436 | 89247424 | 59988 | 0.036 | 0.012 | 0.000 | 0.015 |
| chr7CNV45 | 141420759 | 141433796 | 13037 | 0.036 | 0.060 | 0.067 | 0.056 |
| chr8CNV46 | 3775146 | 3776955 | 1809 | 0.055 | 0.036 | 0.050 | 0.045 |
| chr8CNV47 | 3987675 | 3990899 | 3224 | 0.073 | 0.000 | 0.000 | 0.020 |
| chr8CNV48 | 5583294 | 5591685 | 8391 | 0.018 | 0.036 | 0.000 | 0.020 |
| chr8CNV49 | 13643904 | 13652680 | 8776 | 0.036 | 0.012 | 0.000 | 0.015 |
| chr8CNV50 | 13657871 | 13680110 | 22239 | 0.182 | 0.012 | 0.000 | 0.056 |
| chr8CNV51 | 16307052 | 16309085 | 2033 | 0.018 | 0.048 | 0.000 | 0.025 |
| chr8CNV52 | 72378670 | 72378984 | 314 | 0.000 | 0.036 | 0.000 | 0.015 |
| chr8CNV53 | 137757412 | 137919630 | 162218 | 0.018 | 0.036 | 0.000 | 0.020 |
| chr9CNV54 | 507715 | 513495 | 5780 | 0.055 | 0.000 | 0.000 | 0.015 |
| chr9CNV55 | 581094 | 597738 | 16644 | 0.073 | 0.000 | 0.000 | 0.020 |
| chr9CNV56 | 5376384 | 5382199 | 5815 | 0.109 | 0.000 | 0.000 | 0.030 |
| chr9CNV57 | 9782326 | 9786116 | 3790 | 0.000 | 0.000 | 0.050 | 0.015 |
| chr9CNV58 | 11941204 | 12175185 | 233981 | 0.018 | 0.000 | 0.067 | 0.025 |
| chr10CNV59 | 20891019 | 20894574 | 3555 | 0.000 | 0.036 | 0.033 | 0.025 |
| chr10CNV60 | 45489854 | 47173619 | 1683765 | 0.200 | 0.157 | 0.050 | 0.136 |
| chr10CNV61 | 58186118 | 58188682 | 2564 | 0.036 | 0.024 | 0.000 | 0.020 |
| chr10CNV62 | 58583657 | 58603555 | 19898 | 0.000 | 0.000 | 0.067 | 0.020 |
| chr10CNV63 | 122759910 | 122774261 | 14351 | 0.127 | 0.000 | 0.000 | 0.035 |
| chr10CNV64 | 135116379 | 135219995 | 103616 | 0.073 | 0.060 | 0.017 | 0.051 |
| chr11CNV65 | 5858528 | 5889688 | 31160 | 0.000 | 0.000 | 0.050 | 0.015 |
| chr11CNV66 | 21145662 | 21170916 | 25254 | 0.109 | 0.012 | 0.000 | 0.035 |
| chr11CNV67 | 25574425 | 25580720 | 6295 | 0.036 | 0.012 | 0.000 | 0.015 |
| chr11CNV68 | 25662734 | 25676867 | 14133 | 0.127 | 0.012 | 0.000 | 0.040 |
| chr11CNV69 | 55139733 | 55201444 | 61711 | 0.036 | 0.120 | 0.267 | 0.141 |
| chr11CNV70 | 55217364 | 55346872 | 129508 | 0.036 | 0.000 | 0.000 | 0.010 |
| chr11CNV71 | 81182373 | 81192815 | 10442 | 0.018 | 0.120 | 0.117 | 0.091 |
| chr11CNV72 | 99154024 | 99156143 | 2119 | 0.000 | 0.012 | 0.050 | 0.020 |
| chr11CNV73 | 132499814 | 132509446 | 9632 | 0.000 | 0.036 | 0.000 | 0.015 |
| chr11CNV74 | 134154053 | 134211153 | 57100 | 0.018 | 0.036 | 0.000 | 0.020 |
| chr12CNV75 | 7888157 | 7982106 | 93949 | 0.018 | 0.000 | 0.050 | 0.020 |
| chr12CNV76 | 19364102 | 19442103 | 78001 | 0.000 | 0.024 | 0.017 | 0.015 |
| chr12CNV77 | 31180151 | 31298076 | 117925 | 0.036 | 0.060 | 0.017 | 0.040 |
| chr12CNV78 | 62269256 | 62415375 | 146119 | 0.036 | 0.012 | 0.033 | 0.025 |
| chr12CNV79 | 69162075 | 69162165 | 90 | 0.018 | 0.024 | 0.033 | 0.025 |
| chr12CNV80 | 126056007 | 126056525 | 518 | 0.055 | 0.000 | 0.017 | 0.020 |
| chr12CNV81 | 127794683 | 127830402 | 35719 | 0.000 | 0.012 | 0.017 | 0.010 |
| chr12CNV82 | 130297674 | 130314013 | 16339 | 0.000 | 0.024 | 0.017 | 0.015 |
| chr12CNV83 | 130368913 | 130378451 | 9538 | 0.036 | 0.024 | 0.033 | 0.030 |
| chr14CNV84 | 43576901 | 43584372 | 7471 | 0.000 | 0.000 | 0.133 | 0.040 |
| chr14CNV85 | 85358666 | 85376726 | 18060 | 0.018 | 0.024 | 0.000 | 0.015 |
| chr14CNV86 | 85540054 | 85557089 | 17035 | 0.000 | 0.036 | 0.000 | 0.015 |
| chr14CNV87 | 105997070 | 106237639 | 240569 | 0.073 | 0.157 | 0.067 | 0.106 |
| chr15CNV88 | 30298847 | 30301633 | 2786 | 0.073 | 0.012 | 0.033 | 0.035 |
| chr15CNV89 | 32530025 | 32587887 | 57862 | 0.127 | 0.072 | 0.067 | 0.086 |
| chr15CNV90 | 32724681 | 32757729 | 33048 | 0.000 | 0.036 | 0.000 | 0.015 |
| chr17CNV91 | 6047837 | 6061766 | 13929 | 0.036 | 0.012 | 0.000 | 0.015 |
| chr17CNV92 | 14988424 | 14998870 | 10446 | 0.000 | 0.000 | 0.117 | 0.035 |
| chr18CNV93 | 1915033 | 1964966 | 49933 | 0.018 | 0.036 | 0.000 | 0.020 |
| chr18CNV94 | 64898548 | 64905367 | 6819 | 0.018 | 0.036 | 0.333 | 0.121 |
| chr18CNV95 | 65360121 | 65362926 | 2805 | 0.000 | 0.036 | 0.017 | 0.020 |
| chr19CNV96 | 15641747 | 15690364 | 48617 | 0.091 | 0.000 | 0.000 | 0.025 |
| chr19CNV97 | 20423788 | 20473895 | 50107 | 0.109 | 0.084 | 0.033 | 0.076 |
| chr19CNV98 | 48066441 | 48387680 | 321239 | 0.127 | 0.084 | 0.133 | 0.111 |
| chr20CNV99 | 14729882 | 14770129 | 40247 | 0.036 | 0.036 | 0.000 | 0.025 |
| chr22CNV100 | 17270615 | 17376565 | 105950 | 0.036 | 0.000 | 0.033 | 0.020 |
| chr22CNV101 | 20718332 | 21554058 | 835726 | 0.218 | 0.253 | 0.167 | 0.217 |
| chr22CNV102 | 23994408 | 24239811 | 245403 | 0.055 | 0.060 | 0.033 | 0.051 |
| Total | 7805201 | ||||||
| Average | 76522 | ||||||
| Median | 19624 | ||||||
| Minimum | 90 | ||||||
The 102 CNV regions identified using the 197 DNA samples obtained from 3 ethnic groups.