Table 1.
Structure | Wild-type Co2+-HDAC8-M334 complex | D101L Co2+-HDAC8-M334 complex | D101L Fe2+-HDAC8-M334 complex | D101L Mn2+-HDAC8-M334 complex |
---|---|---|---|---|
Resolution limits, Å | 50 – 3.2 | 50 – 1.9 | 50 – 2.0 | 50 – 1.85 |
Energy/wavelength (eV/Å) | 7725/1.6050 | 11,566/1.0720 | 11,566/1.0720 | 12,660/0.9793 |
Space group | P21 | P21212 | P21212 | P212121 |
Total/unique reflections | 28,240/14,687 | 63,065/33,586 | 53,795/28,881 | 137,178/72,518 |
Completeness (%) (overall/outer shell) | 98.3/90.9 | 97.5/85.4 | 98.7/90.5 | 99.0/98.0 |
Rmergea (overall/outer shell) | 0.132/0.441 | 0.049/0.492 | 0.064/0.254 | 0.099/0.406 |
I/σ(I) (overall/outer shell) | 9.9/2.3 | 38/2.4 | 28.1/5.2 | 19.2/4.1 |
No. of reflections (work set/test set) | 12,996/684 | 28,790/1,576 | 25,924/1,457 | 54,828/6,936 |
R/Rfreeb | 0.204/0.256 | 0.220/0.256 | 0.202/0.247 | 0.201/0.249 |
R.m.s. deviations | ||||
Bond lengths, Å | 0.008 | 0.014 | 0.015 | 0.012 |
Bond angles, ° | 1.3 | 1.4 | 1.4 | 1.2 |
Rmerge = Σ|I−〈I〉|/Σ|I|, where I is the observed intensity and 〈I〉 is the average intensity calculated for replicate data.
Crystallographic R factor, R = Σ||Fo|−|Fc||/Σ|Fo|, for reflections contained in the working set. Free R factor, Rfree = Σ||Fo|−|Fc||/Σ|Fo|, for reflections contained in the test set excluded from refinement. |Fo| and |Fc| are the observed and calculated structure factor amplitudes, respectively.