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. Author manuscript; available in PMC: 2011 Jun 22.
Published in final edited form as: Biochemistry. 2010 Jun 22;49(24):5048–5056. doi: 10.1021/bi1005046

Table 1.

Data collection and refinement statistics

Structure Wild-type Co2+-HDAC8-M334 complex D101L Co2+-HDAC8-M334 complex D101L Fe2+-HDAC8-M334 complex D101L Mn2+-HDAC8-M334 complex
Resolution limits, Å 50 – 3.2 50 – 1.9 50 – 2.0 50 – 1.85
Energy/wavelength (eV/Å) 7725/1.6050 11,566/1.0720 11,566/1.0720 12,660/0.9793
Space group P21 P21212 P21212 P212121
Total/unique reflections 28,240/14,687 63,065/33,586 53,795/28,881 137,178/72,518
Completeness (%) (overall/outer shell) 98.3/90.9 97.5/85.4 98.7/90.5 99.0/98.0
Rmergea (overall/outer shell) 0.132/0.441 0.049/0.492 0.064/0.254 0.099/0.406
I/σ(I) (overall/outer shell) 9.9/2.3 38/2.4 28.1/5.2 19.2/4.1
No. of reflections (work set/test set) 12,996/684 28,790/1,576 25,924/1,457 54,828/6,936
R/Rfreeb 0.204/0.256 0.220/0.256 0.202/0.247 0.201/0.249
R.m.s. deviations
Bond lengths, Å 0.008 0.014 0.015 0.012
Bond angles, ° 1.3 1.4 1.4 1.2
a

Rmerge = Σ|I−〈I〉|/Σ|I|, where I is the observed intensity and 〈I〉 is the average intensity calculated for replicate data.

b

Crystallographic R factor, R = Σ||Fo|−|Fc||/Σ|Fo|, for reflections contained in the working set. Free R factor, Rfree = Σ||Fo|−|Fc||/Σ|Fo|, for reflections contained in the test set excluded from refinement. |Fo| and |Fc| are the observed and calculated structure factor amplitudes, respectively.