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. 2010 May 27;38(Web Server issue):W182–W187. doi: 10.1093/nar/gkq441

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© The Author(s) 2010. Published by Oxford University Press.

This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.5), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.

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Figure 2. — Example results from a typical analysis. Log-ratios corresponding to the eight samples from Kidd et al. (33) were analyzed. (A) Boxplots of log-ratios after (rigth) and before (left) median normalization. (B) Probability-based calling results for chromosome 21. Black points: normalized log-ratios. Blue lines: DNAcopy-segmented log-ratios. Red bars: loss probability. Green bars: red probability (inverted scale). (C) Karyotype including panels with gains (green, above chromosomes) and losses (red, below chromosomes).