A(t) |
2 |
Concentration of cross-bridges in A
|
A1
|
2 |
Steady-state concentration of A
|
AC |
5 |
Cross-sectional area |
AT |
2, 18 |
Total concentration of myosin S1 |
α |
2, 6 |
Rate constant of detachment (A → B), Sch 1–3 |
α′ |
2, 6 |
Rate constant of attachment (B → A), Sch 1–3 |
B(t) |
2, 6 |
Concentration of detached cross-bridges |
B1
|
2 |
Steady-state concentration of B β 6 Rate constant of attachment (B → C), Sch 3 |
β′ |
6 |
Rate constant of detachment (C → B), Sch 3 |
C(t) |
6 |
Concentration of attached cross-bridges in C
|
C1
|
6 |
Steady-state concentration of C D 12 MgADP concentration |
δ, δx
|
3 |
Perturbation |
δl |
4 |
Stretch applied to a cross-bridge (δl>0). δl<0 for release |
δW |
4 |
Work performed on a cross-bridge by stretch (δW>0). δW<0 for release. Eq. 16
|
Eα |
4 |
Activation energy of α (A → B), Fig. 4A
|
|
4 |
Activation energy of α′ (B → A), Fig. 4B
|
ε |
12 |
ε ≡ K1S/(1 + K0D + K1S), Eq. 49
|
η |
19 |
Step size |
F(t) |
5 |
Force time course |
F0
|
19 |
Isometric force at steady sate |
FA(t) |
5 |
Force contribution by state A
|
FG(t) |
5 |
Force contribution by state G
|
φ |
4, 9 |
Unitary force, force/cross-bridge |
G(t) |
5 |
Concentration of strained cross-bridges, Sch 2 |
G1
|
5 |
Steady-state concentration of G
|
γ |
6 |
Rate constant of C → A, Sch 3 |
γ′ |
6 |
Rate constant of A → C, Sch 3 |
H |
A2 |
Reaction matrix, Eq. A12
|
J |
8, 18 |
Turnover rate (ATPase), Eqs. 40, 58
|
K0
|
12 |
Association constant of MgADP, Sch 6 |
K1
|
11 |
Association constant of MgATP, Sch 5 |
k1b
|
16 |
Rate constant of step 1b, Sch 9 |
k−1b
|
16 |
Reversal rate constant of step 1b, Sch 9 |
k2
|
11 |
Rate constant of step 2, Sch 5 |
k−2
|
11 |
Reversal rate constant of step 2, Sch 5 |
K2
|
12 |
Equilibrium constant of step 2, K2 ≡ k2/k−2
|
k4
|
13 |
Rate constant of step 4, Sch 7 |
k−4
|
13 |
Reversal rate constant of step 4, Sch 7 |
K4
|
15 |
Equilibrium constant of step 4, K4 ≡ k4/k−4
|
K5
|
13 |
Association constant of Pi, Sch 7 |
k6
|
14, 18 |
Rate constant of step 6, Sch 8 |
k−6
|
14 |
Reversal rate constant of step 6, Sch 8 |
K6
|
14 |
Equilibrium constant of step 6, K6 ≡ k6/k−6
|
Kα |
7 |
Equilibrium constant of A ↔B. Kα ≡ α/α′ |
Kβ |
7 |
Equilibrium constant of B ↔C. Kβ ≡ β/β′ |
kB |
4 |
Boltzmann’s constant, kB = 1.381 × 10−23 JK−1
|
l0
|
5 |
Half sarcomere length |
λ |
2 |
Apparent rate constant, λ ≡ α + α′, Eq. 4
|
λ2
|
7, 11 |
Apparent rate constant of phase 2. λ2 = 2πc. Eqs. 32, 44, 50
|
λ3
|
7, 13 |
Apparent rate constant of phase 3. λ3 = 2πb. Eqs. 37, 53, 54
|
λ4
|
19 |
Rate constant of force development, Eq. 63
|
M |
8, A2 |
Eqs. 39, A16
|
μ |
5 |
Perturbed rate constant α by stretch δl. μ ≡ α + δα
|
NA |
5 |
Avogadro’s number, NA = 6.022 × 1023/mole |
ν |
19 |
Number of cross-bridge cycles in 1 sec |
P |
13 |
Phosphate concentration |
2πa
|
19 |
Rate constant of process A (phase 4) |
2πb
|
10 |
Rate constant of process B (phase 3) |
2πc
|
10 |
Rate constant of process C (phase 2) |
q |
17 |
Series compliance of half sarcomere |
R |
15 |
Gas constant, R≡kBNA = 8.314 JK−1mol−1
|
ρ |
5 |
Cross-bridge stiffness |
ρ′ |
19 |
Stiffness of half sarcomere |
S |
11 |
Substrate (MgATP) concentration |
σ |
12 |
σ ≡K1SK2/[1 + K0D + K1S(1 + K2)], Eq. 52
|
SP
|
17 |
Parallel stiffness of half sarcomere |
t |
2 |
Time |
T |
4 |
Absolute temperature |
T0
|
15 |
Tension supported by X0 (AM.ADP) |
T1
|
15 |
Tension supported by X1 (AM), Eq. 55
|
T1b
|
15 |
Tension supported by X1b (AM†ATP) |
T2
|
15 |
Tension supported by X2 (AM*ATP), Eq. 55
|
T34
|
15 |
Tension supported by X34 (Det), T34 = 0 |
T5
|
15 |
Tension generated/supported by X5 (AM*ADP.P) |
T6
|
15 |
Tension generated/supported by X6 (AM*ADP) |
TC
|
15 |
Tension of standard activation, C=control |
U |
A2 |
3×3 eigen matrix consisting of 3 eigen (column) vectors. Eq. A20
|
X0(t) |
12 |
Probability of cross-bridges at AM.ADP |
X1(t) |
11 |
Probability of cross-bridges at AM |
X1b(t) |
11 |
Probability of cross-bridges at AM†ATP |
X2(t) |
11 |
Probability of cross-bridges at AM*ATP |
X34(t) |
14 |
Probability of cross-bridges at Det state |
X5(t) |
13 |
Probability of cross-bridges at AM*ADP.Pi |
X6(t) |
13 |
Probability of cross-bridges at AM*ADP |
Xa(t) |
12 |
Probability of strongly attached cross-bridges, Eq. 57, Xa ≡ X0 + X1 + X2 + X5 + X6
|
Ya
|
17 |
Stiffness of cross-bridges in half sarcomere when all are strongly attached |
ζ |
21 |
ζ ≡ K5P/(1 + K5P), Eq. 73
|