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. 2010 Jun 3;2010:426479. doi: 10.1155/2010/426479

Table 2.

Gene annotation enrichment among top predicted genes in the generic IFNG and the IFNG-vaccine networks.

Category Term Count P-Value FDR
GOTERM_BP_ALL GO:0050896~response to stimulus 43 2.99E − 22 5.71E − 19
GOTERM_BP_ALL GO:0007154~cell communication 39 5.74E − 13 1.10E − 09
GOTERM_BP_ALL GO:0007165~signal transduction 35 9.70E − 11 1.86E − 07
GOTERM_BP_ALL GO:0006950~response to stress 29 7.14E − 20 1.37E − 16
GOTERM_BP_ALL GO:0030154~cell differentiation 28 6.94E − 13 1.33E − 09
GOTERM_BP_ALL GO:0006952~defense response 26 7.12E − 23 1.36E − 19
GOTERM_BP_ALL GO:0006955~immune response 26 8.88E − 18 1.70E − 14
GOTERM_BP_ALL GO:0008283~cell proliferation 23 9.37E − 16 1.70E − 12
GOTERM_BP_ALL GO:0008219~cell death 23 2.28E − 15 4.46E − 12
GOTERM_BP_ALL GO:0006915~apoptosis 22 9.38E − 15 1.78E − 11
GOTERM_BP_ALL GO:0007242~intracellular signaling cascade 19 4.85E − 07 9.27E − 04
GOTERM_BP_ALL GO:0001775~cell activation 18 5.86E − 19 1.12E − 15
GOTERM_BP_ALL GO:0006954~inflammatory response 17 8.26E − 16 1.49E − 12
GOTERM_BP_ALL GO:0046649~lymphocyte activation 14 1.77E − 14 3.38E − 11
GOTERM_BP_ALL GO:0006468~protein amino acid phosphorylation 14 2.60E − 07 4.98E − 04
GOTERM_BP_ALL GO:0006807~nitrogen compound metabolic process 13 4.47E − 08 8.56E − 05
GOTERM_BP_ALL GO:0042110~T cell activation 12 9.02E − 14 1.73E − 10
GOTERM_BP_ALL GO:0048534~hemopoietic or lymphoid organ development 12 4.57E − 11 8.74E − 08
GOTERM_CC_ALL GO:0005576~extracellular region 29 5.33E − 18 8.27E − 15
GOTERM_MF_ALL GO:0005125~cytokine activity 19 5.30E − 21 9.51E − 18
GOTERM_MF_ALL GO:0008083~growth factor activity 12 6.77E − 12 1.21E − 08
KEGG_PATHWAY hsa04060:Cytokine-cytokine receptor interaction 23 7.90E − 16 9.77E − 13
KEGG_PATHWAY hsa04620:Toll-like receptor signaling pathway 13 3.12E − 10 3.91E − 07
KEGG_PATHWAY hsa04660:T cell receptor signaling pathway 12 2.04E − 09 2.57E − 06
KEGG_PATHWAY hsa04630:Jak-STAT signaling pathway 11 2.99E − 06 0.003745