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. 2010 May 14;76(13):4530–4537. doi: 10.1128/AEM.00739-10

TABLE 1.

List of oligonucleotides used in this study

Target Sequence (5′-3′)
Product size (bp) Annealing temp (°C)
Forward primer Reverse primer
Msil2632 GCGGCATAGTTGGATTGTTT CATTCCAGCAAGATCGAACC 412 55
Msil2633 CTGCGAAAATCTTCGACCTC GATCGAGCCTTTGACGAGAA 400 55
Msil2634 CTGAAAATTCCCGTCACCAT TTCTCCCAATCGGTGATTTC 421 55
Msil2635 CAAAGAGTGTGGCGTCAAGA TCTCGGTGATGACGTCGTAG 460 55
Msil2636 CGTGCTCAATCTCTGCCATA GAATCCCTTGGTGGTTTCAA 327 55
Msil2638 GGCCGCAATATTTCCCTATT TCGCAGATTGTGATCTCAGC 510 60
Msil2639 GACCGTGTTTGACGTCTCG TCCGTCAACGCATGATAGAG 250 60
Msil2632/Msil2633 CCGATCAATATGTCGCCTTC TGACGTCGCCTTTCACATAG 423 55
Msil2633/Msil2634 GCGCCTTGTATCATTTCCAC GCGCTTGGAGATTTTCTGAC 598 55
Msil2634/Msil2635 CGCCTTGCAAACTACCTTTC TATCAAGCCATGTCGCAAAG 411 55
Msil2635/Msil2636 CATCAGGAATGGCAGGATTT CGAATTCCTTGGCGAGATAA 333 55
Msil2636/Msil2638 AATCGAAGGGCTGTTCTTCA CGTGTCGCCGAAATATCC 591 60
Msil2638/Msil2639 CGCTGAACGATCGCAAAC GAGCGACGCCAACAGCTC 547 60
Construction of gmas mutant CCTGAGAATTCATGATCATGTCGGCATCC CTGGAAGGATCCTCAGCAGTCGAGCGTCTGCTC 1,308 52
Amplification of kan gene cassette GGTAGGTCGACGCATGCGAGCTCGGAAAGCCACGTTGTGTCTC GGTAGGTCGACGCATGCGAGCTCAAGGTGTTGCTGACTCATAC 1,184 55
Confirmation of gmas::kan mutant GCCTTGCAAACTACCTTTCG CGAATTCCTTGGCGAGATAA 2,591 (for mutant), 1,665 (for wild type) 55