TABLE 2.
CT values from three real-time RT-PCR assays and ICPI values
| Isolate | Isolate description |
CT by real-time PCRa |
ICPIb | ||
|---|---|---|---|---|---|
| Matrix | Fusion (old) | Fusion (new) | |||
| G/1997/US/253317778 | Cormorant/US/CAD9704285/1997 | 20.34 | 17.9 | 14.15 | 1.41 |
| G/2006/US/284019497 | Cormorant/US/GACC393-E-06/2006 | 15.14 | 21.87 | 15.73 | (1.49)e |
| G/2002/US/284019469 | Cormorant/US/FLCC415-A/2002 | 23.12 | 18.89 | 14.31 | |
| G/2008/US/284019509 | Cormorant/US/MNAI08-2281/2008 | 22.17 | 0 | 20.31 | |
| G/2008/US/284019507 | Cormorant/US/MNAI08-2266/2008 | 22.15 | 0 | 17.21 | |
| G/2008/US/284019491 | Cormorant/US/MNA00554760/759/2008 | 32.03 | 0 | 32.35 | |
| G/2008/US/284019493 | Cormorant/US/MNA00554750/749/2008 | 21.4 | 0 | 17.49 | 1.36 |
| G/2008/US/284019495 | Cormorant/US/MNA00554748/747/2008 | 21.93 | 0 | 14.48 | 1.54 |
| G/2008/US/284019489 | Cormorant/US/MNA00520459/460/2008 | 22.16 | 0 | 21.74 | |
| G/2008/US/284019487 | Cormorant/US/MNA00520453/454/2008 | 33.34 | 0 | 37.4 | |
| G/2008/US/284019485 | Cormorant/US/MNA00520447/448/2008 | 23.17 | 0 | 17.18 | 1.39 |
| G/2008/US/284019483 | Cormorant/US/MNA00520443/444/2008 | 33.17 | 33.7 | 27.65 | |
| G/2008/US/284019481 | Cormorant/US/MNA00520441/442/2008 | 22.08 | 0 | 15.89 | 1.45 |
| Cormorant/CN98CNN3-V1138/1998 | 20.99 | 20.24 | 13.97 | ||
| G/1998/CA/254847453 | Cormorant/CN/Sask/3-V1125/1998 | 19.36 | 19.38 | 16.71 | 1.53 (1.56)c |
| G/1997/US/254847449 | Cormorant/US/CA23071/1997 | 21.1 | 17.93 | 14.3 | |
| G/1992/CA/111182182 | Cormorant/CN/95DC2585/1995 | 20.43 | 21.58 | 17.94 | |
| G/1995/CA/254847457 | Cormorant/CN/95DC2345/1995 | 18.96 | 18.5 | 15.68 | 1.6 |
| G/1995/CA/111052705 | Cormorant/CN/Ont/2344/1995 | 21.64 | 21.82 | 16.91 | (1.71)c |
| G/1995/CA/254847455 | Cormorant/CN/Ont/2150/1995 | 19.31 | 19.17 | 14.65 | 1.59 (1.60)c |
| Cormorant/US92-45393/1992 | 16.48 | 22.66 | 15.44 | ||
| G/1992/US/284019467 | Cormorant/US92-43888/1992 | 15.52 | 24.94 | 15.71 | |
| G/1992/US/253317820 | Cormorant/US/MN92-40140/1992 | 13.47 | 17.19 | 12.76 | 1.39 (1.35)d |
| G/1992/US/20799674 | Cormorant/US/MI92-40068/1992 | 15.04 | 21.39 | 15.55 | (1.51)d |
| G/2005/US/254847461 | Cormorant/US/NV19529-04/2005 | 31.08 | 0 | 14.99 | 1.53 |
| G/2003/US/254847459 | Cormorant/US/WI18719-03/2003 | 21.61 | 19.61 | 15.95 | 1.41 |
| G/1997/US/284019479 | Cormorant/US/UT14854-02/1997 | 35.65 | 33.35 | 30.53 | |
| G/1997/US/284019477 | Cormorant/US/UT14854-01/1997 | 33.02 | 34.14 | 31.14 | |
| G/1997/US/284019475 | Cormorant/US/CA14803-02/1997 | 20.19 | 29.59 | 34.46 | |
| G/1997/US/284019473 | Cormorant/US/CA14798-03/1997 | 21.27 | 31.48 | 16.74 | |
| Cormorant/US/CA14798-01/1997 | 36.17 | 37.08 | 34.05 | ||
| G/1997/US/284019471 | Cormorant/US/CA14796-08/1997 | 21.7 | 32.55 | 25.95 | |
a
The matrix gene assay, the fusion gene assay and the revised fusion gene assay with a cormorant-specific probe were used.
b
ICPI values are given when they were available. Values in parentheses were reported by others, as specified in footnotes c to e.
c
Reported previously in reference 4.
d
Reported previously in reference 9.
e
Reported previously in reference 21.