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. 2010 May 19;84(15):7473–7483. doi: 10.1128/JVI.00299-10

TABLE 1.

Oligonucleotides used for cloning shRNA expression construct

Target genea Oligonucleotide name Orientationb Sequence (5′ to 3′)c Binding positiond
SEAP OJWB299 Sense TGCTGCATGTCTGCTCGAAGCGGCCGGTTTTGGCCACTGACTGACCGGCCGCTGAGCAGACATG 1539
OJWB300 Antisense CCTGCATGTCTGCTCAGCGGCCGGTCAGTCAGTGGCCAAAACCGGCCGCTTCGAGCAGACATGC
ZASC1 OJWB309 Sense TGCTGTTTGCTGGTTGACTGATTCAGGTTTTGGCCACTGACTGACCTGAATCACAACCAGCAAA 376
OJWB310 Antisense CCTGTTTGCTGGTTGTGATTCAGGTCAGTCAGTGGCCAAAACCTGAATCAGTCAACCAGCAAAC
ZASC1 OJWB546 Sense TGCTGTTGAGGAGAACTGTACATCACGTTTTGGCCACTGACTGACGTGATGTAGTTCTCCTCAA 881
OJWB547 Antisense CCTGTTGAGGAGAACTACATCACGTCAGTCAGTGGCCAAAACGTGATGTACAGTTCTCCTCAAC
ZASC1 OJWB548 Sense TGCTGATAGCAACATGCCTGTTAACAGTTTTGGCCACTGACTGACTGTTAACACATGTTGCTAT 1164
OJWB549 Antisense CCTGATAGCAACATGTGTTAACAGTCAGTCAGTGGCCAAAACTGTTAACAGGCATGTTGCTATC
ZASC1 OJWB550 Sense TGCTGTTATGAGGCAAGTCAGCTGAAGTTTTGGCCACTGACTGACTTCAGCTGTTGCCTCATAA 1362
OJWB551 Antisense CCTGTTATGAGGCAACAGCTGAAGTCAGTCAGTGGCCAAAACTTCAGCTGACTTGCCTCATAAC
a

The gene that the shRNA targets.

b

Denotes whether the oligonucleotide binds on the coding strand (relative to the mRNA of the genes) or noncoding strand.

c

Sequence of the oligonucleotide written in the 5′ to 3′ orientation.

d

The region of the target gene the shRNA corresponds to, relative to the start codon.