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. Author manuscript; available in PMC: 2011 Aug 15.
Published in final edited form as: J Infect Dis. 2010 Aug 15;202(3):416–426. doi: 10.1086/653481

Table 1. Up and downregulated GO categories in T. cruzi-infected heart.

UPREGULATED

GOID GO Name Type Measured %Change Z Score PermuteP
1726 Ruffle C 21 38.10 5.039 0
6955 immune response P 108 19.44 4.817 0
8009 chemokine activity F 19 36.84 4.592 0
5764 Lysosome C 44 31.82 4.487 0
5783 endoplasmic reticulum C 305 14.43 3.806 0
7242 Intracellular signaling cascade P 169 12.43 3.302 0
6935 Chemotaxis P 31 25.81 3.254 0.004
30036 actin cytoskeleton organization & biogenesis P 32 12.50 3.232 0.002
4180 carboxypeptidase activity F 11 27.27 3.22 0.007
16798 hydrolase activity, acting on glicosyl bonds F 25 28.00 3.172 0.004
15629 actin cytoskeleton C 40 10.00 3.09 0.007
5938 cell cortex C 10 20.00 3.035 0.01
7015 actin filament organization P 15 26.67 2.914 0.015
5279 amino acid-polyamine transporter activity F 11 18.18 2.91 0.016
42552 Myelination P 13 23.08 2.806 0.024
8285 negative regulation of cell proliferation P 45 15.56 2.67 0.015
8284 positive regulation of cell proliferation P 56 16.07 2.669 0.014
45596 negative regulation on cell differentiation P 13 7.69 2.603 0.014
8283 cell proliferation P 55 16.36 2.588 0.012
8201 heparin binding F 28 21.43 2.585 0.019
6954 inflammatory response P 67 11.94 2.582 0.008
9986 cell surface C 43 18.60 2.347 0.026
6817 phosphate transport P 40 17.50 2.18 0.039
4896 Hematopoietin/interferon class (D200 Domain) cytokine receptor activity F 16 25.00 2.18 0.048
48754 branching morphogenesis of a tube P 12 33.33 2.123 0.048
45165 cell fate commitment P 16 12.50 2.113 0.038
42127 regulation of cell proliferation P 17 0.00 2.055 0.045
7264 small GTPase mediated signal transduction P 83 10.84 2.055 0.05
DOWNREGULATED

GOID GO Name Type Measured %Change Z Score PermuteP
5739 Mitochondrion C 351 17.38 13.839 0
5737 Cytoplasm C 613 2.61 5.628 0
3824 catalytic activity F 104 5.77 5.241 0
16491 oxidoreductase activity F 208 6.73 4.835 0
3954 NADH dehydrogenase activity F 10 30.00 4.599 0.005
50660 FAD binding F 34 17.65 4.541 0
30170 pyridoxal phosphate binding F 31 16.13 3.871 0.002
5777 Peroxisome C 51 13.73 3.839 0.002
6118 electron transport P 189 7.41 3.727 0
9055 electron carrier activity F 60 8.33 3.349 0.003
5975 carbohydrate metabolic process p 81 6.17 3.169 0.001
16874 ligase activity F 121 8.26 3.123 0.005
8483 transaminase activity F 10 20.00 2.947 0.017
7169 transmembrane receptor protein tyrosine kinase signaling pathway P 30 13.33 2.801 0.012
6631 fatty acid metabolic process P 33 12.12 2.735 0.013
166 nucleotide binding F 715 3.78 2.698 0.007
9058 Biosynthetic process P 31 12.90 2.511 0.009
7050 cell cycle arrest P 24 12.50 2.43 0.034
8152 metabolic process P 288 8.68 2.319 0.025
6629 lipid metabolic process P 87 8.05 2.041 0.043
16740 transferase activity F 558 4.84 1.995 0.044

Note. C = cellular location, F = molecular function, P = biological process.