Table 1. Up and downregulated GO categories in T. cruzi-infected heart.
UPREGULATED | ||||||
---|---|---|---|---|---|---|
GOID | GO Name | Type | Measured | %Change | Z Score | PermuteP |
1726 | Ruffle | C | 21 | 38.10 | 5.039 | 0 |
6955 | immune response | P | 108 | 19.44 | 4.817 | 0 |
8009 | chemokine activity | F | 19 | 36.84 | 4.592 | 0 |
5764 | Lysosome | C | 44 | 31.82 | 4.487 | 0 |
5783 | endoplasmic reticulum | C | 305 | 14.43 | 3.806 | 0 |
7242 | Intracellular signaling cascade | P | 169 | 12.43 | 3.302 | 0 |
6935 | Chemotaxis | P | 31 | 25.81 | 3.254 | 0.004 |
30036 | actin cytoskeleton organization & biogenesis | P | 32 | 12.50 | 3.232 | 0.002 |
4180 | carboxypeptidase activity | F | 11 | 27.27 | 3.22 | 0.007 |
16798 | hydrolase activity, acting on glicosyl bonds | F | 25 | 28.00 | 3.172 | 0.004 |
15629 | actin cytoskeleton | C | 40 | 10.00 | 3.09 | 0.007 |
5938 | cell cortex | C | 10 | 20.00 | 3.035 | 0.01 |
7015 | actin filament organization | P | 15 | 26.67 | 2.914 | 0.015 |
5279 | amino acid-polyamine transporter activity | F | 11 | 18.18 | 2.91 | 0.016 |
42552 | Myelination | P | 13 | 23.08 | 2.806 | 0.024 |
8285 | negative regulation of cell proliferation | P | 45 | 15.56 | 2.67 | 0.015 |
8284 | positive regulation of cell proliferation | P | 56 | 16.07 | 2.669 | 0.014 |
45596 | negative regulation on cell differentiation | P | 13 | 7.69 | 2.603 | 0.014 |
8283 | cell proliferation | P | 55 | 16.36 | 2.588 | 0.012 |
8201 | heparin binding | F | 28 | 21.43 | 2.585 | 0.019 |
6954 | inflammatory response | P | 67 | 11.94 | 2.582 | 0.008 |
9986 | cell surface | C | 43 | 18.60 | 2.347 | 0.026 |
6817 | phosphate transport | P | 40 | 17.50 | 2.18 | 0.039 |
4896 | Hematopoietin/interferon class (D200 Domain) cytokine receptor activity | F | 16 | 25.00 | 2.18 | 0.048 |
48754 | branching morphogenesis of a tube | P | 12 | 33.33 | 2.123 | 0.048 |
45165 | cell fate commitment | P | 16 | 12.50 | 2.113 | 0.038 |
42127 | regulation of cell proliferation | P | 17 | 0.00 | 2.055 | 0.045 |
7264 | small GTPase mediated signal transduction | P | 83 | 10.84 | 2.055 | 0.05 |
DOWNREGULATED | ||||||
---|---|---|---|---|---|---|
GOID | GO Name | Type | Measured | %Change | Z Score | PermuteP |
5739 | Mitochondrion | C | 351 | 17.38 | 13.839 | 0 |
5737 | Cytoplasm | C | 613 | 2.61 | 5.628 | 0 |
3824 | catalytic activity | F | 104 | 5.77 | 5.241 | 0 |
16491 | oxidoreductase activity | F | 208 | 6.73 | 4.835 | 0 |
3954 | NADH dehydrogenase activity | F | 10 | 30.00 | 4.599 | 0.005 |
50660 | FAD binding | F | 34 | 17.65 | 4.541 | 0 |
30170 | pyridoxal phosphate binding | F | 31 | 16.13 | 3.871 | 0.002 |
5777 | Peroxisome | C | 51 | 13.73 | 3.839 | 0.002 |
6118 | electron transport | P | 189 | 7.41 | 3.727 | 0 |
9055 | electron carrier activity | F | 60 | 8.33 | 3.349 | 0.003 |
5975 | carbohydrate metabolic process | p | 81 | 6.17 | 3.169 | 0.001 |
16874 | ligase activity | F | 121 | 8.26 | 3.123 | 0.005 |
8483 | transaminase activity | F | 10 | 20.00 | 2.947 | 0.017 |
7169 | transmembrane receptor protein tyrosine kinase signaling pathway | P | 30 | 13.33 | 2.801 | 0.012 |
6631 | fatty acid metabolic process | P | 33 | 12.12 | 2.735 | 0.013 |
166 | nucleotide binding | F | 715 | 3.78 | 2.698 | 0.007 |
9058 | Biosynthetic process | P | 31 | 12.90 | 2.511 | 0.009 |
7050 | cell cycle arrest | P | 24 | 12.50 | 2.43 | 0.034 |
8152 | metabolic process | P | 288 | 8.68 | 2.319 | 0.025 |
6629 | lipid metabolic process | P | 87 | 8.05 | 2.041 | 0.043 |
16740 | transferase activity | F | 558 | 4.84 | 1.995 | 0.044 |
Note. C = cellular location, F = molecular function, P = biological process.