TABLE 1.
Target | Primer sequence |
Size | Annealing temperature | Cycle # | Ref. | |
---|---|---|---|---|---|---|
Sense | Antisense | |||||
Wnt1 | AAATCGCCCAACTTCTGCA | AATACCCAAAGAGGTCACAGC | 599 | 53.2 | 40 | 16 |
Wnt2 | CGGCCTTTGTTTACGCCATC | TGAATACAGTAGTCTGGAGAA | 513 | 55.3 | 40 | 16 |
Wnt2b | TGTACTCTGCGCACCTGCT | TGCACTCACACTGGGTGAC | 318 | 60.0 | 40 | 16 |
Wnt3a | ATTGAATTTGGAGGAATGGT | CTTGAAGTACGTGTAACGTG | 317 | 57.5 | 40 | 16 |
Wnt4 | TGTACCTGGCCAAGCTGTCAT | TCCGGTCACAGCCACACTT | 344 | 60.0 | 40 | 16 |
Wnt5a | TCCTATGAGAGCGCACGCAT | CAGCTTGCCCCGGCTGTTGA | 224 | 60.0 | 40 | 16 |
Wnt5b | TCGGAGGAGCAGGGCCGAGC | CAGCTTGCCCTGGCGGGTGA | 223 | 65.0 | 40 | 16 |
Wnt6 | GCACCGAGTGTAAGTGCCAT | GAAGCGGCACAGACAGTTCT | 377 | 56.2 | 40 | 16 |
Wnt7a | CAAGGCCAGTACCACTGGGA | GGCTCCACGTGGACGGCCTC | 307 | 56.5 | 40 | 16 |
Wnt7b | ACCAAAACTTGCTGGACCAC | ACGTGTTGCACTTGACGAAG | 385 | 56.2 | 40 | 16 |
Wnt8b | AACGTGGGCTTCGGAGAGGC | GCCCGCGCCTTGCAGCAGGT | 272 | 62.9 | 40 | 16 |
Wnt9b | GTAAGTGCCATGGTGTGTC | GTGTCATAGCGTAGCTTCAG | 160 | 55 | 28 | 17 |
Wnt10a | AAAGTCCCCTACGAGAGCCC | CAGCTTCCGACGGAAAGCTT | 179 | 52.3 | 40 | 16 |
Wnt10b | CGGCTGCCGCACCACAGCGC | CAGCTTGGCTCTAAGCCGGT | 179 | 59.3 | 40 | 16 |
Wnt11 | GTGGCTGCTGACCTCAAGACC | TTCTTCATGCAGAAGTCAGGAG | 103 | 55 | 28 | 17 |
Wnt16 | ACAGCATCCAGATCTCAGAC | ACTACATGGGTGTTGTAGCC | 238 | 55 | 28 | 17 |
Frz2 | CTAGCGCCGCTCTTCGTGTACCTG | CAGCGTCTTGCCCGACCAGATCCA | 387 | 60 | 25 | 18 |
Frz3 | TAGCAATGGAGCCCTTCCACC | CTCCATATCTTCAGGCCACGG | 200 | 55 | 28 | 17 |
Frz4 | GCTTGTGCTATGTTGGGAACCCAC | ACAGGTTGCAGGAACCGT | 230 | 55 | 28 | 17 |
Frz5 | GTCTGTGCTGTGCTTCATC | AGTGACACACACAGGTAGCA | 123 | 55 | 28 | 17 |
Frz6 | TGAAGGAGAGAAGCAATGGATC | TGAACAGGCAGAGATGTGGAG | 160 | 55 | 28 | 17 |
Frz7 | GCCAGACCCACCTTTCACT | CGAACCGTCTCTCCTCTTCTT | 198 | 58 | 35 | 19 |
Frz8 | TTTGTGCTGGCGCCACTGGTT | TAGAGCACGGTGAAGAGGCCC | 170 | 55 | 28 | 17 |
Frz9 | CGGAGTCTTTTCCATCCTTTACAC | GCCATTTTTCGGTAGCACAGG | 250 | 58 | 35 | 20 |
Frz10 | TGTCCGGTTGCTACACCATGGGCT | GCCAGGAACCAGGTGAGG | 220 | 55 | 28 | 17 |
LRP5 | GATGTGCGGCTAGTGGATG | GCCCGAGATGACAATGTTCT | 195 | 58 | 35 | 21 |
LRP6 | GGGCCGATGCAAAACTTAAT | CCTCTGTTGGCTGAAAGCAT | 242 | 58 | 35 | 21 |
Dsh1 | GGGGGTAGTGGCAGTGAA | ACCTGTAAGTTCTGGAGGGACA | 237 | 58 | 35 | 21 |
Dsh2 | GCAGTGGCAGTGAGTCAGAA | TCATGGGGTTATAGGGGAGAG | 192 | 58 | 35 | 21 |
Dsh3 | CAAGGAGAAGGACCCAAAAG | ATCGGGGGACCATAGAGAG | 240 | 58 | 35 | 21 |
APC | TCACCTAGCGGGACTGTTG | CTTCTTCGTGTTGGTGCTCA | 132 | 55 | 40 | Roel Nusse, The Wnt Homepage (Stanford, Palo Alto, CA) |
Axin1 | CAGGGTTTCCCCTTGGACC | GGTCAAACATGGCAGGATC | 535 | 58 | 30 | 22 |
Axin2 | CTCCTTGGAGGCAAGAGC | GGCCACGCAGCACCGCTG | 657 | 58 | 40 | 23 |
GSK3β | CAGCAGCCTTCAGCTTTTGG | CCGGAACATAGTCCAGCACCAG | 358 | 60 | 35 | 24 |
Rspo1 | TGTGAAATGAGCGAGTGGTCC | TCTCCCAGATGCTCCAGTTCT | 416 | 58 | 32 | 25 |
Rspo2 | TTGCATAGAGGCCGCTGCTTT | CTGGTCAGAGGATCAGGAATG | 501 | 58 | 32 | 25 |
Rspo3 | GTACACTGTGAGGCCAGTGAA | ATGGCTAGAACACCTGTCCTG | 474 | 58 | 32 | 25 |
Rspo4 | CTGGAGTCCCTGCATACACAA | CACGGGGAGAAGGAAAGTTTC | 439 | 58 | 32 | 25 |