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. 2010 May 4;285(28):21292–21302. doi: 10.1074/jbc.M110.129874

TABLE 1.

RT-PCR primers

Primers and conditions used to detect multiple cWnt signaling molecules as depicted in Fig. 1A. The RT-PCR primers were designed to recognize mouse sequences.

Target Primer sequence
Size Annealing temperature Cycle # Ref.
Sense Antisense
Wnt1 AAATCGCCCAACTTCTGCA AATACCCAAAGAGGTCACAGC 599 53.2 40 16
Wnt2 CGGCCTTTGTTTACGCCATC TGAATACAGTAGTCTGGAGAA 513 55.3 40 16
Wnt2b TGTACTCTGCGCACCTGCT TGCACTCACACTGGGTGAC 318 60.0 40 16
Wnt3a ATTGAATTTGGAGGAATGGT CTTGAAGTACGTGTAACGTG 317 57.5 40 16
Wnt4 TGTACCTGGCCAAGCTGTCAT TCCGGTCACAGCCACACTT 344 60.0 40 16
Wnt5a TCCTATGAGAGCGCACGCAT CAGCTTGCCCCGGCTGTTGA 224 60.0 40 16
Wnt5b TCGGAGGAGCAGGGCCGAGC CAGCTTGCCCTGGCGGGTGA 223 65.0 40 16
Wnt6 GCACCGAGTGTAAGTGCCAT GAAGCGGCACAGACAGTTCT 377 56.2 40 16
Wnt7a CAAGGCCAGTACCACTGGGA GGCTCCACGTGGACGGCCTC 307 56.5 40 16
Wnt7b ACCAAAACTTGCTGGACCAC ACGTGTTGCACTTGACGAAG 385 56.2 40 16
Wnt8b AACGTGGGCTTCGGAGAGGC GCCCGCGCCTTGCAGCAGGT 272 62.9 40 16
Wnt9b GTAAGTGCCATGGTGTGTC GTGTCATAGCGTAGCTTCAG 160 55 28 17
Wnt10a AAAGTCCCCTACGAGAGCCC CAGCTTCCGACGGAAAGCTT 179 52.3 40 16
Wnt10b CGGCTGCCGCACCACAGCGC CAGCTTGGCTCTAAGCCGGT 179 59.3 40 16
Wnt11 GTGGCTGCTGACCTCAAGACC TTCTTCATGCAGAAGTCAGGAG 103 55 28 17
Wnt16 ACAGCATCCAGATCTCAGAC ACTACATGGGTGTTGTAGCC 238 55 28 17
Frz2 CTAGCGCCGCTCTTCGTGTACCTG CAGCGTCTTGCCCGACCAGATCCA 387 60 25 18
Frz3 TAGCAATGGAGCCCTTCCACC CTCCATATCTTCAGGCCACGG 200 55 28 17
Frz4 GCTTGTGCTATGTTGGGAACCCAC ACAGGTTGCAGGAACCGT 230 55 28 17
Frz5 GTCTGTGCTGTGCTTCATC AGTGACACACACAGGTAGCA 123 55 28 17
Frz6 TGAAGGAGAGAAGCAATGGATC TGAACAGGCAGAGATGTGGAG 160 55 28 17
Frz7 GCCAGACCCACCTTTCACT CGAACCGTCTCTCCTCTTCTT 198 58 35 19
Frz8 TTTGTGCTGGCGCCACTGGTT TAGAGCACGGTGAAGAGGCCC 170 55 28 17
Frz9 CGGAGTCTTTTCCATCCTTTACAC GCCATTTTTCGGTAGCACAGG 250 58 35 20
Frz10 TGTCCGGTTGCTACACCATGGGCT GCCAGGAACCAGGTGAGG 220 55 28 17
LRP5 GATGTGCGGCTAGTGGATG GCCCGAGATGACAATGTTCT 195 58 35 21
LRP6 GGGCCGATGCAAAACTTAAT CCTCTGTTGGCTGAAAGCAT 242 58 35 21
Dsh1 GGGGGTAGTGGCAGTGAA ACCTGTAAGTTCTGGAGGGACA 237 58 35 21
Dsh2 GCAGTGGCAGTGAGTCAGAA TCATGGGGTTATAGGGGAGAG 192 58 35 21
Dsh3 CAAGGAGAAGGACCCAAAAG ATCGGGGGACCATAGAGAG 240 58 35 21
APC TCACCTAGCGGGACTGTTG CTTCTTCGTGTTGGTGCTCA 132 55 40 Roel Nusse, The Wnt Homepage (Stanford, Palo Alto, CA)
Axin1 CAGGGTTTCCCCTTGGACC GGTCAAACATGGCAGGATC 535 58 30 22
Axin2 CTCCTTGGAGGCAAGAGC GGCCACGCAGCACCGCTG 657 58 40 23
GSK3β CAGCAGCCTTCAGCTTTTGG CCGGAACATAGTCCAGCACCAG 358 60 35 24
Rspo1 TGTGAAATGAGCGAGTGGTCC TCTCCCAGATGCTCCAGTTCT 416 58 32 25
Rspo2 TTGCATAGAGGCCGCTGCTTT CTGGTCAGAGGATCAGGAATG 501 58 32 25
Rspo3 GTACACTGTGAGGCCAGTGAA ATGGCTAGAACACCTGTCCTG 474 58 32 25
Rspo4 CTGGAGTCCCTGCATACACAA CACGGGGAGAAGGAAAGTTTC 439 58 32 25