Table 1.

Number of alleles and genetic diversity (He) by locus and population (N = 94 monoclonal infections).

	Number of Alleles/locus				Allelic Richness				He
Populations	A1	A2	B	C	A1	A2	B	C
	n = 15	n = 9	n = 39	n = 31	h = 11	h = 7	h = 19	h = 5	A1	A2	B	C
MS1	4	3	3	2	3.96	2.99	2.15	1.45	0.77	0.56	0.2	0.07
MS2	5	3	4	4	4.74	2.99	3.33	3.16	0.79	0.67	0.65	0.57
MS3	3	3	3	2	2.96	2.99	2.99	1.86	0.59	0.42	0.67	0.19
MS4	5	4	3	3	4.62	3.99	2.73	2.71	0.73	0.81	0.36	0.55
MS5	2	2	2	2	1.96	1.99	1.96	1.45	0.25	0.22	0.27	0.07
MS6	6	3	5	5	5.51	2.99	4.1	3.61	0.83	0.67	0.64	0.59
MS7	3	2	1	2	2.58	2	1	2	0.26	0.56	0	0.43
MS8	5	5	9	3	4.55	5	5.73	2.45	0.73	0.89	0.74	0.47
MS9	5	4	6	4	4.34	3.99	4.81	3.3	0.56	0.69	0.74	0.59
MS10	6	3	4	2	5.34	2.99	3.46	1.71	0.8	0.42	0.53	0.13
MS12	6	5	7	3	5.68	4.97	4.71	2.45	0.85	0.72	0.64	0.47
MS15	6	6	6	4	5.5	5.97	3.86	3.16	0.81	0.89	0.51	0.57
MS16	8	6	7	4	7.25	5.97	4.91	3.3	0.91	0.83	0.71	0.59
MS20	6	6	5	4	5.47	5.97	4.44	3.41	0.77	0.89	0.75	0.59
Pv6635	5	4	6	4	4.34	3.99	4.75	3.3	0.56	0.69	0.72	0.59
Pvsal	6	6	5	5	5.16	5.97	4.45	3.61	0.74	0.89	0.69	0.59
Mean	4.81	4.44	4.75	3.31	4.62	4.05	3.71	2.64	0.66	0.69	0.55	0.44

h: number of unique haplotypes