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. 2008 May 21;29(7):1380–1385. doi: 10.1093/carcin/bgn121

Table V.

Association between haplotypes in block1 of DNMT1 or DNMT3B and a number of BPDE-induced chromatid breaks per cell

Haplotype Frequency (%) Effect per haplotype allele
P-valueb Permuted P-valuebc Likelihood ratio P-valued
Estimatea 95% CI
DNMT1 0.015 0.037
    H284 51 1.16 1.05–1.28 0.003
    H200 36 0.87 0.79–0.97 0.010
    H48 9 1.03 0.86–1.23 0.760
    Hother 4 0.87 0.70–1.08 0.203
DNMT3B 0.056 0.023
    H145 22 0.94 0.82–1.07 0.321
    H149 20 1.02 0.89–1.16 0.785
    H91 14 0.99 0.84–1.16 0.893
    H70 11 1.24 1.05–1.45 0.009
    H49 8 0.93 0.77–1.12 0.445
    Hother 25 0.93 0.82–1.04 0.205

CI, confidence interval.

a

Estimate is the ratio of breaks per cell between any common haplotype and all other haplotypes in each gene.

b

P-value is from multiple linear regression model comparing haplotype to all other haplotypes and including adjustment for sex, seeding count and current smoking status.

c

The mutagen sensitivity data were permuted for the 278 subjects 10 000 times at random. Permuted P-values were calculated based on Chen et al. (28).

d

P-value is from multiple linear regression model with all haplotypes considered simultaneously and adjustment for sex, seeding count and current smoking status.