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. 2010 Jul 8;6(7):e1000842. doi: 10.1371/journal.pcbi.1000842

Table 1. Regulatory logic selections and the simulation results for the yeast cell-cycle oscillator.

Cfg. Inline graphic Inline graphic Inline graphic Complex PSP
1 Inline graphic Inline graphic Inline graphic 0 0
2 Inline graphic Inline graphic Inline graphic 0.05 0.13
3 Inline graphic Inline graphic Inline graphic 0.22 0.3
4 Inline graphic Inline graphic Inline graphic 0.65 0.35
5 Inline graphic Inline graphic Inline graphic 0 0
6 Inline graphic Inline graphic Inline graphic 0.01 0.04
7 Inline graphic Inline graphic Inline graphic 0.05 0.14
8 Inline graphic Inline graphic Inline graphic 0.58 0.3

All logic configurations tested, which employ different Boolean function combinations for repression, SFF and CLN3. Last two columns show the fraction of realizations that exhibit complex (includes multi-pulse) and periodic single-pulse oscillations in an ensemble of 10000 realizations of the network with quenched random delays. The simulations employ noise and short-pulse rejection. Standard errors in the fractions quoted are of Inline graphic, which were estimated by pooling the results into bins of 500 realizations each.