Table 1. Regulatory logic selections and the simulation results for the yeast cell-cycle oscillator.
Cfg. | Complex | PSP | |||
1 | 0 | 0 | |||
2 | 0.05 | 0.13 | |||
3 | 0.22 | 0.3 | |||
4 | 0.65 | 0.35 | |||
5 | 0 | 0 | |||
6 | 0.01 | 0.04 | |||
7 | 0.05 | 0.14 | |||
8 | 0.58 | 0.3 |
All logic configurations tested, which employ different Boolean function combinations for repression, SFF and CLN3. Last two columns show the fraction of realizations that exhibit complex (includes multi-pulse) and periodic single-pulse oscillations in an ensemble of 10000 realizations of the network with quenched random delays. The simulations employ noise and short-pulse rejection. Standard errors in the fractions quoted are of , which were estimated by pooling the results into bins of 500 realizations each.