Table 2. Chemical Shifts of H2′ Protons in Loop vs Stema.
sequence | avg measured δ of H2′ in WC pair not terminal or 5′ of AG or GA loop | measured δ of H2′ 5′ of AG or GA loop | NUCHEMICS prediction of δ of H2′ 5′ of AG or GA loop |
---|---|---|---|
5′-GACGAGCGUCA | 4.41 ± 0.13 | 3.97 | 4.28 ± 0.14 |
ACUGCGAGCAG-5′ | |||
5′-GGCAGGCCb | 4.40 ± 0.14 | 4.06 | 4.64 |
CCGGACGG-3′ | |||
5′-GACUAGAGUCA | 4.41 ± 0.18 | 4.16 | 4.57 ± 0.02 |
ACUGAGAUCAG-5′ | |||
5′-GACAAGUGUCA | 4.44 ± 0.14 | 4.15 | 4.63 ± 0.05 |
ACUGUGAACAG-5′ | |||
5′-GCGGACGCc | 4.36 ± 0.11 | 3.74 | 4.44 |
CGCAGGCG-5′ | |||
5′-GGUAGGCCA | 4.43 ± 0.15 | 3.78 | 4.02 ± 0.10 |
ACCGGAUGG-5′ | |||
5′-GGiCGAiGCCAd | 4.37 ± 0.11 | 4.15 | N/A |
ACCiGAGiCGG-5′ | |||
avg | 4.41 ± 0.14 | 4.00 ± 0.17 | 4.43 ± 0.22 |