Table 1.

Summary of differential splicing events between human, chimpanzee and rhesus cerebellums identified by the HJAY array

		Cassette exons	Alternative 5′/3′ splice sites	Mutually exclusive exon usage
Human versus chimpanzee	Differential splicing eventsa	281	29	26
	Splicing events analyzedb	1985	323	338
Human versus rhesus	Differential splicing events	340	51	24
	Splicing events analyzed	1126	195	180

^aIdentified by MADS+ (see Supplementary Material, Methods).

^bThe total set of splicing events that passed the filters for gene expression level in the cerebellum, probe intensity and number of perfect-match probes for orthologous chimpanzee or rhesus transcripts (see Supplementary Material, Methods). These splicing events were analyzed by MADS+ for the detection of splicing differences between species.