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. 2010 Jul 9;5(7):e11502. doi: 10.1371/journal.pone.0011502

Table 3. QPCR validation of gene expression data.

Microarray24 Hours Microarray48 Hours Microarray72 Hours qPCR72 Hours
Gene symbol Median Fold-Change(F/C) Corrected p Value Median Fold-Change(F/C) Corrected p Value Median Fold-Change(F/C) Corrected p Value Average Fold-Change(F/C)
CCNI 1/1.68 0.26 1/2.46 0.28 1/3.00 5.22E-05 1/1.54
1/2.24 0.27 1/4.59 0.25 1/3.31 0.0017
1/2.57 0.23 1/3.32 0.33 1/3.44 0.0035
1/2.27 0.23 1/2.90 0.34 1/4.21 3.63E-04
WNT5a 1/3.88 0.15 1/2.56 0.41 1/2.31 0.017
WNT3 1.26 0.40 1.90 0.41 2.81 .023
FZD10 1.28 0.86 1/1.34 0.88 15.48 0.0092
BECN1 1.05 0.88 1.65 0.37 2.04 0.051 1.66
1.39 0.27 1.37 0.50 1.61 0.15
CDC45L 3.15 0.34 6.19 0.51 3.16 0.14
DPM1 1.10 0.79 1.51 0.19 2.40 5.00E-04 1/1.11
1.17 0.52 1.47 0.51 2.15 0.0024
SNX1 1.69 0.21 1.22 0.39 2.65 7.07E-04 5.62
EME1 1.03 0.27 1.03 0.65 5.29 0.0032 1.38
1.99 0.25 3.52 0.36 1.08 0.31
FBXO8 1.03 0.27 2.02 0.22 3.42 0.0072 1.96
1/1.99 0.25 2.05 0.37 2.16 0.031
PIGW 2.09 0.041 2.58 0.33 4.30 6.38E-04 1.64
CDH20 1/1.11 0.87 1/1.28 0.56 1/8.20 0.0018 1/8.11
1.13 0.89 1/2.19 0.51 1/22.25 4.52E-05
ITGA4 1.09 0.36 1/1.18 0.51 1/1.06 0.47 1/3.67
1/1.87 0.080 1/1.40 0.49 1/2.08 0.089
1.16 0.47 1/1.42 0.51 1/2.28 0.055
NLGN1 1.06 0.30 1/1.12 0.51 1.02 0.43 1/1.46
1.08 0.27 1/1.08 0.51 1/1.01 0.87
1/5.92 0.23 1/3.90 0.15 1/1.25 0.45
1/2.58 0.27 1/3.08 0.51 1/2.11 0.0046
1.06 0.28 1/1.05 0.51 1/2.99 0.011
CDKN1B (p27) 1/1.27 0.30 1/2.97 0.49 1/2.12 0.015 2.64
1/1.77 0.15 1/1.72 0.22 1/2.21 9.92E-04
OCM 1/1.27 0.307 1/153.66 0.14 1/64.33 1.81E-04 1/13.45

QPCR and microarray data for individual genes of interest and genes selected for qPCR validation as described in the text. Multiple microarray values represent different probe sets for the same gene.