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. Author manuscript; available in PMC: 2010 Jul 10.
Published in final edited form as: J Am Chem Soc. 2009 Mar 11;131(9):3246–3252. doi: 10.1021/ja807853m

Table 4.

Second-order rate constants (kcat/KM values) for heteropair and mispair synthesis and extension with dMMO2 or a derivative in the template (context II).a

5′-TAATACGACTCACTATAGGGAGC(Y)
3′-ATTATGCTGAGTGATATCCCTCG(X)TCTAGGTTACGGCAGGATCGC

X Y Synthesis (M−1min−1) Extension (M−1min−1)
MMO2 5SICS (6.6 ± 0.5) × 107 (1.7 ± 0.8) × 106
MMO2 (1.8 ± 1.2) × 106 <1.0 × 103
A (1.7 ± 0.3) × 106 (1.1 ± 0.3) × 104
G (7.9 ± 2.1) × 103 <1.0 × 103
C (3.0 ± 0.8) × 103 (4.4 ± 1.0) × 105
T (5.2 ± 2.7) × 103 (2.0 ± 0.6) × 106
5NaM 5SICS (5.5 ± 0.7) × 107 (4.1 ± 0.1) × 106
5NaM (4.8 ± 1.2) × 106 <1.0 × 103
A (1.4 ± 0.4) × 106 (1.4 ± 0.1) × 104
G (3.7 ± 0.4) × 103 <1.0 × 103
C (6.4 ± 2.6) × 103 (3.0 ± 0.7) × 105
T (8.3 ± 1.4) × 103 (8.3 ± 0.6) × 105
5FM 5SICS (8.0 ± 0.8) × 107 (8.2 ± 0.3) × 106
5FM (2.7 ± 0.6) × 106 <1.0 × 103
A (3.1 ± 0.1) × 106 (4.4 ± 0.1) × 104
G (1.2 ± 0.4) × 103 <1.0 × 103
C (7.5 ± 0.6) × 103 (1.5 ± 0.4) × 106
T (1.2 ± 0.6) × 104 (4.1 ± 1.0) × 106
a

See Experimental Section for details.