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. 2010 May 14;76(14):4601–4610. doi: 10.1128/AEM.02991-09

TABLE 2.

S. enterica strains selected for DNA microarray and phenotypic analysis

Strain no. German federal state Origin Serotype Phage typed Resistanceb PFGE cluster MLVAc Size of plasmid(s) (kb)
07-00040 Schleswig-Holstein Pork 4,5,12:i:− DT193 AMP, SMX, STR, TET B 2-7-6-0-2 None
07-04070 North Rhine-Westphalia Pork 4,5,12:i:− RDNC AMP, SMX, STR, TET B 2-4-4-0-2 None
07-00711 Thuringia Pork 4,5,12:i:−a DT59 AMP, SPE, STR, SXT, TET, TMP A 2-8-5-0-2 121, 6, 3
07-01548 North Rhine-Westphalia Pork 4,5,12:i:− DT193 AMP, CHL, FFN, NAL, SMX, STR, TET C 2-5-4-0-1 106
07-02081 Bavaria Pork 4,5,12:i:− DT193 AMP, SMX, STR, TET B 2-6-19-0-2 None
07-02603 Lower Saxony Pork 4,5,12:i:− DT193 AMP, SMX, STR, TET B 2-7-4-0-2 None
07-03608 Lower Saxony Pork 4,5,12:i:− DT193 AMP, SMX, STR, TET B 2-6-20-0-2 21
07-00009 North Rhine-Westphalia Pork 4,12:i:− DT120 AMP, SMX, STR, TET A 2-5-7-0-2 None
07-01272 Saxony-Anhalt Pork 4,12:i:− DT120 AMP, SMX, STR, TET A 2-5-8-0-2 3, 2
07-01585 Schleswig-Holstein Pork 4,12:i:− DT193 AMP, CHL, FFN, NAL, SMX, STR, TET C 2-5-4-0-3 None
07-02902 Baden-Württemberg Pork 4,12:i:− RDNC AMP, TET B 2-5-5-0-3 111
07-03017 Lower Saxony Pork 4,12:i:−a NT AMP, CHL, FFN, SMX, STR, TET D 2-7-5-0-2 2
07-03371 North Rhine-Westphalia Pork 4,12:i:− DT193 AMP, SMX, STR, TET B 2-4-4-0-2 None
06-04525 North Rhine-Westphalia Pork 4,5,12:i:−a DT120 AMP, SMX, STR, TET A 2-7-5-0-2 None
06-04991 Brandenburg Pork 4,5,12:i:−a DT120 AMP, KAN, NEO, SMX, SPE, STR, SXT, TET, TMP, A 2-7-5-0-2 131, 3
06-04115 Saxony Pork 4,12:i:− NT SMX, SPE, STR, SXT, TET, TMP A 2-2-7-0-2 43, <2
06-04419 Lower Saxony Pig 4,12:i:−a NT TET A 2-5-5-0-3 2.2, 2
06-04446 North Rhine-Westphalia Pig 4,5,12:i:− RDNC Susceptible E 1-3-20-2-3 94
06-05055 Brandenburg Pig 4,12:i:− DT193 AMP,KAN, NEO, SMX, SPE, STR, TET A 2-5-19-0-2 100, 73, 5, <2
06-05089 Lower Saxony Pig 4,12:i:− DT193 AMP, CHL, FFN, SMX, SPE, STR, SXT, TET, TMP B 2-7-19-0-2 54
07-00244 Lower Saxony Pig 4,5,12:i:−a RDNC AMP, SMX, STR, TET D 2-7-2-0-2 None
07-00404 Lower Saxony Pig 4,12:i:− DT120 AMP, SMX, STR, TET A 2-5-5-0-2 None
07-00528 Lower Saxony Pig 4,12:i:−a DT120 AMP, SMX, STR, TET A 2-7-5-0-2 5, 3
07-00679 Saxony-Anhalt Pig 4,5,12:i:− DT120 AMP, SMX, STR, SXT, TET, TMP A 2-5-20-0-2 None
07-00768 Lower Saxony Pig 4,5,12:i:− DT193 AMP, SMX, STR, TET B 2-4-20-0-2 None
07-00769 Lower Saxony Pig 4,5,12:i:− DT193 TET B 2-5-4-0-2 94
07-01173 Lower Saxony Pig 4,5,12:i:− DT193 AMP, SMX, STR, TET B 2-6-4-0-1 None
07-01526 Lower Saxony Pig 4,5,12:i:−a DT120 Susceptible A 2-6-4-0-2 None
07-01536 North Rhine-Westphalia Pig 4,12:i:− DT193 CHL, FFN, NAL, TET B 2-5-5-0-2 None
07-01577 North Rhine-Westphalia Pig 4,12:i:−a DT120 TET A 2-6-5-0-2 None
07-01798 Lower Saxony Pig 4,5,12:i:− DT120 KAN, NEO B 2-6-4-0-2 3
07-02006 Lower Saxony Pig 4,5,12:i:− DT193 AMP, SMX, STR, TET B 2-6-4-0-2 None
07-02199 Lower Saxony Pig 4,5,12:i:− DT193 AMP, SMX, STR, TET B 2-4-5-0-2 2.2, 2
07-02432 Lower Saxony Pig 4,5,12:i:− DT193 AMP, SMX, STR, TET B 2-6-5-0-2 None
07-02684 Lower Saxony Pig 4,12:i:− DT193 AMP, SMX, STR, SXT, TET, TMP B 2-6-20-0-1 5, <2
07-02736 Lower Saxony Pig 4,5,12:i:− DT193 AMP, SMX,STR, TET B 2-6-17-0-2 None
07-02781 Rheinland-Pfalz Pig 4,5,12:i:− DT193 Susceptible D 18-6-3-2-2 94
07-02789 Thuringia Pig 4,5,12:i:− DT193 AMP, SMX, STR, TET B 2-5-4-0-2 None
07-02809 North Rhine-Westphalia Pig 4,5,12:i:− DT120 AMP, SMX, STR, TET A 2-5-4-0-2 2.4, 2.2
07-03136 Lower Saxony Pig 4,5,12:i:−a DT120 KAN, NEO, SMX, SPE, STR, SXT, TET, TMP D 2-4-6-0-2 111, 94
07-03327 Lower Saxony Pig 4,5,12:i:− DT193 AMP, SMX, SPE, STR, SXT, TET, TMP B 2-6-7-0-2 102
07-03466 Lower Saxony Pig 4,5,12:i:− DT193 AMP, SMX, STR, TET B 2-7-3-0-2 None
08-03968 Hamburg Human 4,5,12:i:− DT193 AMP, SMX, STR, TET B 2-6-4-0-2 None
08-03969 Hamburg Human 4,5,12:i:− DT7 TET A 2-5-5-0-2 5
08-03972 Hamburg Human 4,5,12:i:−a DT120 AMP, CHL, FFN, SMX, TET D 2-7-3-4-3 94, 5
08-03974 Hamburg Human 4,5,12:i:− DT120 AMP, SMX, STR, TET A 2-7-19-0-2 None
08-03979 Berlin Human 4,5,12:i:− DT193 AMP, SMX, STR, TET B 2-4-5-0-2 None
08-03985 Lower Saxony Human 4,12:i:− U302 AMP, CIP, NAL, SMX, STR, TET C 2-5-4-0-3 65
08-03987 Baden-Württemberg Human 4,5,12:i:−a DT120 AMP, SMX, STR, TET A 2-7-5-0-2 None
08-03988 North Rhine-Westphalia Human 4,12:i:− DT193 AMP, SMX, STR, TET B 2-4-4-0-2 54
08-03990 Saxony Human 4,5,12:i:− DT193 TET B 2-6-4-0-2 None
08-03996 Lower Saxony Human 4,12:i:− DT193 AMP SMX STR TET B 2-4-6-0-2 None
08-03997 Lower Saxony Human 4,12:i:− DT193 AMP, SMX, STR, TET B 2-6-20-0-1 None
08-03999 Saxony-Anhalt Human 4,5,12:i:− DT120 AMP, SMX, STR, TET A 2-5-4-0-2 None
08-04002 Schleswig-Holstein Human 4,5,12:i:− DT193 AMP, SMX, STR, TET B 2-4-4-0-2 None
08-04009 Mecklenburg Western Pomerania Human 4,5,12:i:− DT193 AMP, SMX, STR, TET B 2-6-5-0-2 None
08-04018 Saxony-Anhalt Human 4,5,12:i:− DT193 AMP, SMX, STR, TET B 2-5-4-0-2 None
08-04019 Mecklenburg Western Pomerania Human 4,5,12:i:− NT AMP, SMX, STR B 2-6-4-0-2 None
08-04024 Thuringia Human 4,12:i:− DT193 Susceptible A 2-6-7-0-2 2, <2
08-04030 Saxony-Anhalt Human 4,5,12:i:−a DT193 AMP, SMX, STR, TET B 2-5-5-0-2 None
08-04031 Rhineland-Palatinate Human 4,5,12:i:− NT AMP, TET A 2-6-20-0-2 6, 3
06-04998 North Rhine-Westphalia Pig 4,5,12:i:1,2 DT104 AMP, SMX, STR, TET D 5-2-8-0-2 3
07-00577 Lower Saxony Pig 4,12:i:1,2 DT120 AMP, CHL, GEN, SMX, STR, TET A 2-5-4-0-2 132,30
07-00635 Lower Saxony Pig 4,12:i:1,2 DT120 AMP, CHL, KAN, NEO, SMX, STR, TET A 2-6-5-0-2 3, 9, 30
07-01010 Lower Saxony Pig 4,5,12:i:1,2 DT120 AMP, KAN, NEO, SMX, SPE, STR, SXT, TET, TMP A 2-6-19-0-2 170, 114, 4
07-01529 Lower Saxony Pig 4,5,12:i:1,2 DT120 AMP, SMX, STR A 2-5-4-0-2 132, 6, 3
07-02186 Lower Saxony Pig 4,12:i:1,2 DT029 AMP, SMX, STR, SXT, TET, TMP A 2-6-0-0-2 70
07-02788 Thuringia Pig 4,5,12:i:1,2 DT120 AMP, SMX, SPE, STR, SXT, TMP A 2-8-5-0-2 120
07-03137 Lower Saxony Pig 4,5,12:i:1,2 DT193 KAN, NEO, SMX, SPE, STR, SXT, TET, TMP, A 2-6-4-0-2 140, 4
07-03250 North Rhine-Westphalia Pig 4,12:i:1,2 DT120 AMP, SMX, STR, SXT, TET, TMP A 2-5-20-0-2 120
07-03714 Lower Saxony Pig 4,12:i:1,2 RDNC AMP, SMX, STR, TET D 2-6-5-0-2 25, 3
09-01035 Schleswig-Holstein Human 4,5,12:i:1,2 DT193 AMP, SMX, STR, TET D 5-2-5-0-2 91, 2
09-01036 Mecklenburg Western Pomerania Human 4,5,12:i:1,2 DT120 AMP SMX STR TET A 2-5-20-0-2 3, 4
09-01037 Mecklenburg Western Pomerania Human 4,5,12:i:1,2 DT120 AMP, SMX, STR, TET A 2-5-20-0-2 6, 4, 3
09-01039 Saxony-Anhalt Human 4,5,12:i:1,2 DT193 AMP, SMX, STR, TET D 5-2-17-0-2 91
09-01041 Saxony-Anhalt Human 4,5,12:i:1,2 DT120 AMP, SMX, STR, TET A 2-8-20-0-2 4
09-01043 Mecklenburg Western Pomerania Human 4,5,12:i:1,2 DT193 AMP, SMX, STR, TET D 4-2-3-0-2 91
09-01044 Mecklenburg Western Pomerania Human 4,5,12:i:1,2 DT193 AMP, SMX, STR, TET D 4-2-2-0-2 91
09-01045 Mecklenburg Western Pomerania Human 4,12:i:1,2 DT193 AMP, SMX, STR, TET A 2-7-20-0-2 108
09-01046 Saxony Human 4,5,12:i:1,2 DT120 AMP, SMX, STR, TET A 2-5-20-0-2 None
09-01047 Saxony-Anhalt Human 4,12:i:1,2 DT120 AMP, SMX, STR A 2-5-20-0-2 None
a

PCR positive for fljB_1,2.

b

Abbreviations are given in Materials and Methods.

c

Order of VNTR loci: STTR9-STTR5-STTR6-STTR10-STTR3. According to Larsson et al. (16) STTR3 allele number 2 corresponds to number 211, number 1 corresponds to 111, and number 3 corresponds to 311.

d

NT, nontypeable.