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. 2010 May 28;76(14):4851–4857. doi: 10.1128/AEM.02799-09

TABLE 3.

Putative open reading frames present in pLM33 and their putative functions

CDSa % GC content No. of amino acids BLAST-based putative function (E value)
pLM33_0001 36.35 408 Transposase element IS712A, Listeria grayi DSM 20601 (0; 100% identity)
pLM33_0002 37.02 252 Putative transposase helper protein for IS712A, Lactococcus lactis subsp. cremoris MG1363 (3E−79; 98.0159% identity)
pLM33_0003 35.49 200 Transposase, Listeria monocytogenes FSL J1-194 (1E−111; 100% identity)
pLM33_0004 41.67 251 Hypothetical protein
pLM33_0005 38.79 54 Hypothetical protein
pLM33_0006 42.59 586 Plasmid replication protein RepR, Listeria grayi DSM 20601 (0; 94.0199% identity)
pLM33_0007 28.93 52 Hypothetical protein
pLM33_0008 30.09 348 Rep63B, Listeria monocytogenes FSL J1-194 (0; 100% identity)
pLM33_0009 29.63 98 Hypothetical protein
pLM33_0010 42.15 426 Possible DNA-directed DNA polymerase, Listeria grayi DSM 20601 (0; 100% identity)
pLM33_0011 41.16 114 Hypothetical protein
pLM33_0012 32.55 254 Hypothetical protein
pLM33_0013 35.11 449 Putative transposase for insertion sequence element IS3 family protein, Listeria monocytogenes FSL J (0; 100% identity)
pLM33_0014 40.05 704 ATP-dependent Clp protease, ATP-binding subunit ClpL, Listeria monocytogenes FSL J1-194 (0; 100% identity)
pLM33_0015 34.6 78 Cro/CI family phage transcriptional regulator, Listeria monocytogenes FSL J1-194 (1E−37; 100% identity)
pLM33_0016 36.92 92 Hypothetical protein
pLM33_0017 38.42 202 Putative resolvase, N-terminal domain protein, Listeria monocytogenes FSL J1-194 (1E−104; 93.9698% identity)
pLM33_0018 29.82 246 Hypothetical protein
pLM33_0019 29.32 588 Hypothetical protein
pLM33_0020 36.3 44 Hypothetical protein
pLM33_0021 40.78 84 Hypothetical protein
pLM33_0022 38.05 289 Integrase catalytic region, Listeria monocytogenes FSL J1-194 (1E−170; 100% identity)
pLM33_0023 33.61 238 Hypothetical protein
pLM33_0024 33.75 240 CRISPR-associated Cas5 family protein, Listeria monocytogenes FSL J1-194 (1E−128; 100% identity)
pLM33_0025 34.74 141 Hypothetical protein
pLM33_0026 32.89 75 Hypothetical protein
pLM33_0027 35.84 92 Hypothetical protein
pLM33_0028 38.62 125 Hypothetical protein
pLM33_0029 39.97 220 Hypothetical protein
pLM33_0030 37.92 108 Hypothetical protein
pLM33_0031 34.6 78 Hypothetical protein
pLM33_0032 41.15 80 Putative PemI-like inhibitor, Listeria monocytogenes FSL J1-194 (5E−39; 100% identity)
pLM33_0033 41.23 113 Putative PemK-like protein, Listeria monocytogenes FSL J1-194 (8E−47; 100% identity)
pLM33_0034 39.98 711 Cadmium resistance protein B, Listeria monocytogenes FSL J1-194 (0; 100% identity)
pLM33_0035 35.28 119 Putative cadmium efflux system accessory protein, Bacillus sp. strain NRRL B-14911 (4E−29; 92.562% identity)
pLM33_0036 38.02 184 Resolvase, Listeria monocytogenes FSL J1-194 (1E−102; 100% identity)
pLM33_0037 36.83 971 Transposase, Listeria monocytogenes FSL J1-194 (0; 100% identity)
a

Database coding sequence designation.