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. 2010 May 14;76(14):4720–4729. doi: 10.1128/AEM.00474-10

TABLE 2.

Primers used in this study

Use and primer Sequence (5′-3′) Tm (°C) Product size (bp)
Splice overlap extension PCR
    SOEAtoxRS ACC GTA GAA CCG TGA TTT AGG 54 289
    SOEBtoxRS ATG GCG ATT ACA TTC GCG T 55
    SOECtoxRS ACG CGA ATG TAA TCG CCA T 67 353
TTG AGT CTG AAG AAA GCG GG
    SOEDtoxRS CGG CAC CAA ATT TCT ACT TG 52
    SOEArpoS TCA GCT CAG CTT AAT CCC TGA 56 507
    SOEBrpoS CCT GAC GCA AAC TCT GA 55
    SOECrpoS TCA GAG TTG TTT GAG TCA GG 68 315
C GTC AAACTCTTCACGGACA
    SOEDrpoS ATT GCG ACC ATG GGT AGT TC 55
    SOEFLtoxRSF AGC CAC TTT ATG AGT GCC TA 53 1,840
    SOEFLtoxRSR GGA CGA CTT TGT GAT TTA GC 51
    SOEFLrpoSF ACA GCA TTG CTT TCA TGA AC 55 1,950
    SOEFLrpoSR AAA GAG CCG CCA AAG AAA GT 55
Real-time PCR
    cadA Forward TTG TAT GCC TCA GTC GCT TG 55 138
    cadA Reverse TCA CGC ATT TGC TAA CGA AC 54
    toxR Forward GAG ATT CCG CTG GGT TTG TA 55 101
    toxR Reverse TGT GGC TTC TGC TGT GAA TC 55.5
    rpoS Forward ATT TGA CGT ACA CGC TCA CG 55.5 165
    rpoS Reverse CGT CTT TGA TCC ATT GGT TG 52
    16S Forward ACG GCC TGG GGA GTA CGG TC 60 234
    16S Reverse TTG CGC TCG TTG CGG GAC TT 60