Table 2.
Haplotype | Control freq. | Alcoholics freq. | Permutated χ2 | Permutated P | |
---|---|---|---|---|---|
SNP1-18 | CG | 0.465 | 0.446 | 0.162 | 0.9746 |
TA | 0.372 | 0.445 | 2.606 | 0.3251 | |
CA | 0.074 | 0.085 | 0.191 | 0.9658 | |
TG | 0.089 | 0.023 | 9.274 | 0.0091 | |
SNP1-4-18 | CCG | 0.454 | 0.417 | 0.657 | 0.9772 |
TAA | 0.353 | 0.416 | 1.996 | 0.6734 | |
CAA | 0.069 | 0.071 | 0.009 | 1.0000 | |
TCG | 0.057 | 0.008 | 8.339 | 0.0126 | |
TAG | 0.037 | 0.020 | 1.175 | 0.8638 | |
TCA | 0.016 | 0.029 | 0.869 | 0.9391 | |
CAG | 0.010 | 0.024 | 1.350 | 0.8132 | |
SNP1-4-7-18* | CCCG | 0.437 | 0.419 | 0.168 | 1.0000 |
TATA | 0.344 | 0.414 | 2.457 | 0.5736 | |
CACA | 0.063 | 0.063 | 0 | 1.0000 | |
TATG | 0.041 | 0.024 | 1.160 | 0.8833 | |
TCCG | 0.052 | 0.006 | 8.453 | 0.0117 | |
TCTA | 0.021 | 0.029 | 0.345 | 0.9999 | |
CACG | 0.005 | 0.019 | 2.054 | 0.6753 |
SNP7 genotypic distribution in controls deviates from HWE.