Table 1.
Short tandem repeat profiles (number of repeats at each locus is indicated) of 14 established esophageal adenocarcinoma cell lines*
Cell line | Short tandem repeat locus |
|||||||||||||||
Penta E | D18S51 | D21S11 | TH01 | D3S1358 | FGA | TPOX | D8S1179 | vWA | Penta D | CSF1PO | D16S539 | D7S820 | D13S317 | D5S818 | Amg | |
SEG-1 | 5 | 13, 15 | 30 | 9.3 | 15, 18 | 21, 23 | 8 | 12 | 17 | 11, 13 | 11, 12 | 9 | 9, 12 | 13 | 9, 10 | X, Y |
BIC-1 | 10 | 13 | 30, 30.2 | 8 | 15, 16 | 24 | 11 | 13 | 16 | 9, 15 | 13, 14 | 9, 13 | 8, 9 | 12 | 13 | X |
FLO-1 | 5, 17 | 14, 16 | 30, 32.2 | 6 | 15 | 21 | 9, 11 | 13 | 16 | 11, 12 | 11 | 12, 13 | 8 | 11 | 12, 14 | X |
KYAE-1 | 5, 8 | 14, 15 | 29, 31 | 6 | 15, 16 | 18 | 8 | 13, 14 | 14 | 9, 10 | 11 | 11 | 11, 12 | 11, 12 | 10, 13 | X |
OE19 | 5, 8 | 12, 13 | 30 | 8, 9 | 15, 18 | 23, 26 | 8 | 13, 15 | 16, 17, 18 | 9 | 11, 13 | 12, 13 | 8 | 9, 11 | 11, 14 | X |
OE33 | 12, 18 | 12 | 29, 31.2 | 7, 8 | 18 | 23 | 8, 11 | 10, 11, 12 | 17 | 9, 11 | 10, 11 | 12 | 9, 10 | 14 | 11 | X |
OACM5.1 | 7, 14 | 16 | 28, 31 | 6, 9.3 | 16, 17 | 22 | 8 | 13, 14 | 19, 20 | 10 | 10, 13 | 10, 11 | 8 | 11, 12 | 12 | X |
OACP4C | 20 | 12, 13 | 30 | 9 | 18 | 20 | 11 | 13 | 16 | 12 | 11 | 12 | 9, 11 | 12 | 9 | X |
SK-GT-4 | 7 | 14 | 31.2 | 6, 9.3 | 17 | 22, 23 | 8, 10 | 13 | 17, 19 | 9 | 11, 15 | 11, 12, 13 | 7, 11 | 9, 10 | 12 | X |
SK-GT-5 | 15, 17 | 14, 15 | 32.2 | 8, 9 | 15 | 26 | 9, 12 | 15 | 15, 18 | 9 | 10 | 11, 12 | 9, 10 | 12, 13 | 10 | X |
BE-3 | 10, 16 | 17 | 30.2 | 9 | 16, 17 | 22 | 8, 10 | 12, 14 | 18 | 13 | 11 | 12 | 8, 11 | 11, 12 | 11, 13 | X |
JH-EsoAd1 | 11 | 12 | 30 | 6, 7 | 16 | 24 | 8, 9 | 10 | 18, 19 | 14 | 10 | 10, 12 | 10, 12 | 11 | 11 | X |
ESO26 | 12, 14 | 17 | 30 | 9 | 15 | 21 | 7, 9 | 13, 14 | 14, 18 | 10 | 9, 10 | 9 | 11 | 9, 11 | 12 | X, Y |
ESO51 | 17 | 17, 20 | 30, 33.2 | 9 | 15, 16 | 21, 22 | 8 | 10, 11, 12 | 14, 15 | 9, 13 | 10 | 13 | 8 | 11 | 11 | X |
The profile of cell line SEG-1 is identical to large cell lung carcinoma cell line H460. The profile of cell line BIC-1 is identical to colon adenocarcinoma cell line SW620. The profile of cell line SK-GT-5 is identical to gastric adenocarcinoma cell line SK-GT-2. Amg = Amelogenin.