Table 3. Comparison of fold-change data from geniom arrays and quantitative RT–PCRa.
| Gene | Geniom arrays | Quantitative RT–PCR | ||
|---|---|---|---|---|
| Average fold-change | Average fold-change (log2) | Average fold-change | Average fold-change (log2) | |
| YMR175W | 111.05 | 6.80 | 164.81 | 7.36 |
| YBR117C | 85.37 | 6.42 | 2112.88 | 11.04 |
| YER150W | 34.41 | 5.10 | 76.91 | 6.27 |
| YDL223C | 29.00 | 4.86 | 42.23 | 5.40 |
| YAL061W | 21.70 | 4.44 | 23.62 | 4.56 |
| YDL204W | 19.18 | 4.26 | 33.15 | 5.05 |
| YGR248W | 19.12 | 4.26 | 2.04 | 4.46 |
| YKL151C | 13.54 | 3.76 | 10.67 | 3.42 |
| YHR087W | 9.88 | 3.30 | 33.58 | 5.07 |
| YGR066C | 8.57 | 3.10 | 16.75 | 4.07 |
| YML054C | 7.25 | 2.86 | 4.39 | 2.14 |
| YHR094C | 6.44 | 2.69 | 8.31 | 3.05 |
| YML100W | 6.35 | 2.67 | 7.08 | 2.82 |
| YLR267W | 5.12 | 2.36 | 3.06 | 1.61 |
| YER103W | 4.91 | 2.30 | 4.32 | 2.11 |
| YKL150W | 4.21 | 2.07 | 5.48 | 2.45 |
| YHR022C | 4.02 | 2.01 | 5.63 | 2.49 |
| YLR031W | 3.98 | 1.99 | 4.36 | 2.12 |
| YEL039C | 3.71 | 1.89 | 2.96 | 1.56 |
| YMR031C | 3.06 | 1.61 | 1.50 | 0.59 |
| YCL040W | 2.91 | 1.54 | 4.25 | 2.09 |
| YER054C | 2.62 | 1.39 | 3.18 | 1.67 |
| YDR533C | 2.31 | 1.21 | 2.06 | 1.04 |
| YGR170W | 2.27 | 1.18 | 1.69 | 0.76 |
| YJL149W | 2.22 | 1.15 | 3.30 | 1.72 |
| YDR100W | 2.09 | 1.06 | 1.84 | 0.88 |
| YDR463W | 2.08 | 1.06 | 1.50 | 0.58 |
| YLR042C | 2.06 | 1.04 | 2.13 | 1.09 |
| YER041W | 1.72 | 0.78 | –1.05 | –0.07 |
| YGR146C | 1.54 | 0.63 | 1.46 | 0.55 |
| YMR030W | 1.45 | 0.54 | 2.11 | 1.08 |
| YHR086W | 1.30 | 0.38 | –1.09 | –0.12 |
| YDL135C | 1.15 | 0.21 | –1.93 | –0.95 |
| YKL160W | –1.17 | –0.22 | –2.56 | –1.35 |
| YBL002W | –1.18 | –0.24 | –1.53 | –0.61 |
| YGR138C | –1.24 | –0.31 | –2.64 | –1.40 |
| YDR324C | –1.39 | –0.48 | –10.36 | –3.37 |
| YKL109W | –1.84 | –0.88 | –4.99 | –2.32 |
| YER165W | –2.19 | –1.13 | –7.59 | –2.92 |
| YGR155W | –3.04 | –1.61 | –7.15 | –2.84 |
| YGL055W | –3.29 | –1.72 | –10.69 | –3.42 |
| YDL198C | –3.32 | –1.73 | –37.42 | –5.23 |
| YHR128W | –3.68 | –1.88 | –12.13 | –3.60 |
| YJL217W | –3.92 | –1.97 | –7.19 | –2.85 |
| YDL014W | –4.47 | –2.16 | –22.89 | –4.52 |
| YGR060W | –4.55 | –2.19 | –16.32 | –4.03 |
| YKR013W | –4.60 | –2.20 | –1.96 | –0.97 |
| YER052C | –6.24 | –2.64 | –21.92 | –4.45 |
| YGR234W | –8.91 | –3.16 | –33.48 | –5.07 |
aValues in the geniom columns represent averages from 10 identical experiments (Fig. 4). All fold-change values can be found in Supplementary Material Table 2B.