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. 2010 Jul 13;5(7):e11564. doi: 10.1371/journal.pone.0011564

Table 2. Summary of difference in allelic variation at the IFIH1 locus.

Gene SNP Alleles Tissue Mean allelic ratio DNA ± SEMa Mean allelic ratio cDNA ± SEMa pb Powerc
IFIH1 rs1990760 T/C LCL 1.0000±0.0077 1.0029±0.0106 0.8477 100.0%
IFIH1 rs1990760 T/C Thymus 1.0000±0.0596 1.0855±0.0341 0.2002 99.9%
IFIH1 rs1990760 T/C Pancreas 1.0000±0.1009 1.0630±0.0791 0.6334 70.7%
GCA rs7587426 C/T LCL 1.0000±0.0415 1.0939±0.0637 0.2373 99.6%
GCA rs7587426 C/T Thymus 1.0000±0.0435 0.9999±0.0427 0.9994 100.0%
GCA rs7587426 C/T Pancreas 1.0000±0.1751 0.8840±0.0429 0.4393 36.1%
FAP rs2075302 T/C LCL could not be detected by PCR, not expressed in B lymphocytes / /
FAP rs2075302 T/C Thymus 1.0000±0.0375 0.9835±0.0408 0.8387 100.0%
FAP rs2075302 T/C Pancreas 1.0000±0.0030 1.0251±0.0321 0.6606 100.0%
KCNH7 rs2068330 C/G LCL could not be detected by PCR, not expressed in B lymphocytes / /
KCNH7 rs2068330 C/G Thymus could not be detected by PCR, not expressed in thymus / /
KCNH7 rs2068330 C/G Pancreas could not be detected by PCR, not expressed in pancreas / /
a

n = 9 for LCLs, n = 13 for thymus, n = 6 for pancreas.

b

statistical significance as measured by the two-tailed student t test.

c

statistical power to detect a 40% difference of expression between alleles, at an α = 0.01.