TABLE 4.
Genes showing discordant or >50% difference in response between oleate and palmitate adaptation in HepG2 cells
| % Amelioration |
|||||
|---|---|---|---|---|---|
| Gene Symbol | Entrez Gene ID | Gene Name | Fold Changea | Palmitate | Oleate |
| PIK3IP1 | 113791 | Phosphoinositide-3-kinase interacting protein 1 | 2.58 | 32 | 100 |
| DUSP8 | 1850 | Dual specificity phosphatase 8 | 3.86 | 28 | 98 |
| GPR109B | 8843 | G protein-coupled receptor 109B | 3.21 | 2 | 91 |
| ZNF295 | 49854 | Zinc finger protein 295 | 2.12 | 5 | 84 |
| SLC25A25 | 114789 | Solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25 | 2.36 | 6 | 84 |
| GADD45B | 4616 | Growth arrest and DNA-damage-inducible, β | 2.77 | 21 | 74 |
| VNN2 | 8875 | Vanin 2 | 2.00 | −41 | 70 |
| SERPINB8 | 5271 | Serpin peptidase inhibitor, clade B (ovalbumin), member 8 | 2.29 | 9 | 63 |
| EGR1 | 1958 | Early growth response 1 | 5.66 | 3 | 56 |
| TUBB2B | 347733 | Tubulin, β 2B | 2.03 | −8 | 56 |
| SERPINE1 | 5054 | Serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 | 2.10 | −54 | 48 |
| C10orf10 | 11067 | Chromosome 10 open reading frame 10 | 2.40 | −63 | 40 |
| TANC1 | 85461 | Tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 | 3.08 | 88 | 38 |
| GATA6 | 2627 | GATA binding protein 6 | 2.60 | 108 | 31 |
| AREG | 374 | Amphiregulin (schwannoma-derived growth factor) | 3.66 | 91 | 25 |
| KLF5 | 688 | Kruppel-like factor 5 (intestinal) | 2.18 | 81 | 4.33 |
| IKBKE | 9641 | Inhibitor of κ light polypeptide gene enhancer in B-cells, kinase ϵ | 2.40 | 57 | −1 |
| DUSP2 | 1844 | Dual specificity phosphatase 2 | 3.31 | 50 | −4 |
| CYR61 | 3491 | Cysteine-rich, angiogenic inducer, 61 | 2.11 | 50 | −12 |
| THBS1 | 7057 | Thrombospondin 1 | 2.84 | 62 | −71 |
| SLC6A14 | 11254 | Solute carrier family 6 (amino acid transporter), member 14 | 2.24 | 37 | −73 |
Only genes with at least 2-fold upregulation by 1 mM palmitate exposure (6 h) in HepG2 cells and discordance between oleate and palmitate adaptation are shown.
Fold change is taken from the acute 1 mM response to palmitate compared with control (BSA).