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. Author manuscript; available in PMC: 2011 Jan 1.
Published in final edited form as: Nat Biotechnol. 2010 Jul;28(7):691–693. doi: 10.1038/nbt0710-691

Table 1.

Bioinformatics Cloud Resources

Applications
CloudBLAST34 Scalable BLAST in the Clouds http://www.acis.ufl.edu/~ammatsun/mediawiki-1.4.5/index.php/CloudBLAST_Project
CloudBurst19 Highly Sensitive Short Read Mapping http://cloudburst-bio.sf.net
Cloud RSD26 Reciprocal Smalest Distance Ortholog Detection http://roundup.hms.harvard.edu
Contrail27 De novo assembly of large genomes http://contrail-bio.sf.net
Crossbow22 Alignment and SNP Genotyping http://bowtie-bio.sf.net/crossbow/
Myrna25 Differential expression analysis of mRNA-seq http://bowtie-bio.sf.net/myrna/
Quake35 Quality guided correction of short reads http://github.com/davek44/error_correction/
Analysis Environments & Datasets
AWS Public Data Cloud copies of Ensembl, GenBank, 1000 Genomes Data, etc… http://aws.amazon.com/publicdatasets/
CLoVR Genome and metagenome annotation and analysis http://clover.igs.umaryland.edu
Cloud BioLinux Genome Assembly and Alignment http://www.cloudbiolinux.com/
Galaxy29 Platform for interactive large-scale genome analysis http://galaxy.psu.edu