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. 2010 Jul 16;5(7):e11622. doi: 10.1371/journal.pone.0011622

Table 1. Genes induced at 6 hours and 12 hours of reaeration, in comparison to 7 days hypoxia (Num >1, q<0.5).

Rv # Gene Description Rv # Gene Name
Rv0011c conserved membrane protein Rv2122c phosphoribosyl-AMP pyrophosphatase hisE
Rv0076c membrane protein Rv2249c glycerol-3-phosphate dehydrogenase glpD1
Rv0077c oxidoreductase Rv2359 ferric uptake regulation protein furB
Rv0140 conserved hypothetical protein Rv2386c isochorismate synthase mbtI
Rv0250c conserved hypothetical protein Rv2460c ATP-dependent clp protease proteolytic subunit 2
Rv0251c heat shock protein hsp Rv2461c ATP-dependent clp protease proteolytic subunit 1
Rv0276 conserved hypothetical protein Rv2464c DNA glycosylase
Rv0327c cytochrome P450 135A1 cyp135A1 Rv2465c ribose-5-phosphate isomerase
Rv0332 conserved hypothetical protein Rv2504c succinyl-CoA:3-ketoacid-CoA transferase subunit
Rv0350 chaperone protein dnaK Rv2516c hypothetical protein
Rv0351 chaperone grpE Rv2643 arsenic-transport membrane protein arsC
Rv0352 chaperone protein dnaJ1 Rv2650c phiRv2 phage protein
Rv0353 heat shock protein transcriptional repressor Rv2672 secreted protease
Rv0383c conserved secreted protein Rv2674 methionine sulfoxide reductase
Rv0384c endopeptidase ATP binding protein chain B clpB Rv2690c conserved alanine, valine and leucine rich membrane protein
Rv0416 hypothetical protein thiS Rv2709 conserved membrane protein
Rv0563 protease transmembrane protein heat shock protein htpX Rv2714 conserved alanine and leucine rich protein
Rv0586 transcriptional regulator, gntR-family Rv2744c conserved alanine rich protein
Rv0590A MCE-family related protein Rv2745c transcriptional regulator
Rv0627 conserved hypothetical protein Rv2865 conserved hypothetical protein
Rv0654 Dioxygenase Rv2895c mycobactin utilization protein viuB
Rv0753c methylmalonate-semialdehyde dehydrogenase mmsA Rv2913c D-amino acid aminohydrolase
Rv0762c conserved hypothetical protein Rv3012c glutamyl-tRNA(gln) amidotransferase subunit C gatC
Rv0790c hypothetical protein Rv3046c conserved hypothetical protein
Rv0791c conserved hypothetical protein Rv3047c hypothetical protein
Rv0793 conserved hypothetical protein Rv3048c ribonucleoside-diphosphate reductase beta chain
Rv0885 conserved hypothetical protein Rv3054c conserved hypothetical protein
Rv1013 polyketide synthase pks16 Rv3064c conserved membrane protein
Rv1167c transcriptional regulator Rv3097c triacylglycerol lipase, PE-PGRS family protein
Rv1168c PPE family protein Rv3160c transcriptional regulator, tetR-family
Rv1218c tetronasin-transport ATP-binding protein ABC transporter Rv3164c methanol dehydrogenase transcriptional regulator moxR3
Rv1222 conserved hypothetical protein Rv3165c hypothetical protein
Rv1224 hypothetical protein tatB Rv3172c hypothetical protein
Rv1234 transmembrane protein Rv3177 Peroxidase
Rv1235 sugar-binding lipoprotein lpqY Rv3188 conserved hypothetical protein
Rv1236 sugar-transport membrane protein ABC transporter sugA Rv3189 conserved hypothetical protein
Rv1259 uracil dna glycosylase Rv3201c ATP-dependent DNA helicase
Rv1286 sulfate adenyltransferase/adenylylsulfate kinase Rv3205c conserved hypothetical protein
Rv1472 enoyl-CoA hydratase echA12 Rv3260c transcriptional regulator whib-like whiB2
Rv1528c polyketide synthase associated protein papA4 Rv3269 conserved hypothetical protein
Rv1590 conserved hypothetical protein Rv3406 Dioxygenase
Rv1623c membrane cytochrome D ubiquinol oxidase subunit I cydA Rv3429 PPE family protein
Rv1673c conserved hypothetical protein Rv3515c fatty-acid-CoA ligase fadD19
Rv1773c transcriptional regulator Rv3527 hypothetical protein
Rv1809 PPE family protein Rv3530c Oxidoreductase
Rv1817 Flavoprotein Rv3531c hypothetical protein
Rv1879 conserved hypothetical protein Rv3538 Dehydrogenase
Rv1908c catalase-peroxidase-peroxynitritase T katG Rv3545c cytochrome P450 125 cyp125
Rv1989c hypothetical protein Rv3839 conserved hypothetical protein
Rv2008c conserved hypothetical protein Rv3863 hypothetical alanine rich protein
Rv2053c transmembrane protein Rv3913 thioredoxin reductase trxB2
Rv2072c precorrin-6y methyltransferase cobL