Table 1. Genes Increasing Expression Early with V-ATPase Inhibitors and not with DFO or Low LDL.
Fold Increase Relative to Control | |||||||||
Gene | Name | Function or Pathway | Baf 6 hr | Baf 12 hr | LX 12 hr | DFO 6 hr | DFO 12 h | low LDL 6 hr | low LDL 12 hr |
CCNG2 | cyclin G2 | cell cycle control | 1.5 | 2.0 | 2.0 | NC | NC | NC | NC |
CLCN6 | chloride channel 6, isoform ClC-6a | chloride transport | 8.0 | 2.1 | NC | NC | NC | NC | NC |
DUSP6 | dual specificity phosphatase 6 | inactivates ERK2 | 2.3 | 2.6 | NC | NC | NC | NC | NC |
FADSD6 | delta-6 fatty acid desaturase | lipid biosynthersis | 1.7 | 3.4 | 2.4 | NC | NC | NC | NC |
SREBF2 | sterol regulatory element binding transcription factor 2 | cholesterol biosynthesis | 1.5 | 2.0 | NC | NC | NC | NC | NC |
TUBA1A | tubulin, alpha 1a | microtubule protein | 1.3 | 2.1 | 1.4 | NC | NC | NC | NC |
WDR37 | WD repeat domain 37 | unknown | 1.9 | 1.9 | NC | NC | NC | NC | NC |
Genes upregulated 2-fold or more after 12 hours in cells treated with V-ATPase inhibitors and in cells treated with 100 µM deferoxamine are listed. Baf, 15 nM bafilomycin A; LX, 200 nM LX1077; DFO, 100 µM deferoxamine; low LDL, cells incubated in medium containing LDL depleted serum.