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. Author manuscript; available in PMC: 2010 Jul 16.
Published in final edited form as: Biochemistry. 2007 Dec 23;47(3):893–901. doi: 10.1021/bi701737f

Table II.

Active-Site Distances (Å)

Contact Paira 105T HNMT 105I HNMT
SAM-Binding Domain Initial 37°C Initial 37°C
M32 CE – I142 CG2 3.6 8.5 ± 4.3 3.6 7.1 ± 2.4
P90 CD –T119 CB 5.3 5.3 ± 0.4 5.3 5.2 ± 0.6
P90 CD – M144 CD 8.2 13.1 ± 2.1 8.2 13.3 ± 2.7
Q94 CG – I142 CB 12.7 13.9 ± 1.6 12.7 14.7 ± 2.1
S120 CB – M144 CG 7.1 9.1 ± 1.6 7.1 8.5 ± 2.0
Histamine-Binding Domain
E28 OE1-Q143 NE2 3.5 12.4 ± 7.1 3.0 9.5 ± 4.1
E28 OE2 – N283 ND2 2.7 9.2 ± 4.6 2.7 8.8 ± 2.7
Q143 NE2 – N283 ND2 5.7 8.6 ± 1.5 5.8 11.2 ± 1.7
F9 CB – C196 CB 6.7 19.1 ± 6.0 6.7 11.7 ± 3.8
F19 CG – Y147 OH 7.4 17.6 ± 2.8 7.4 11.4 ± 3.6
V173 CG1 – F243 CZ 8.6 16.5 ± 2.2 8.6 12.4 ± 1.9
W183 CG – Y198 CG 3.7 4.7 ± 0.4 3.7 4.7 ± 0.1
a

Contact distances were calculated over the last 5 ns (5,000 structures) of each simulation. All values are expressed as means and standard deviations of the means of three independent simulations at 37°C.