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. Author manuscript; available in PMC: 2010 Jul 18.

Published in final edited form as: J Mol Biol. 2010 Feb 1;397(2):467–480. doi: 10.1016/j.jmb.2010.01.052

Table 2.

HLA-G^KLPAQFYIL contacts

Peptide residue	HLA-G residue	Interaction
Lys1
Lys	Met5, Tyr7, Glu62, Glu63, Tyr159, Trp167, Tyr171	vdW
Lys^N	Tyr7^OH	H-bond
	Tyr171^OH	H-bond
Lys^Nζ	Glu62^Oε2, Glu62^Oε1a	Salt bridge
	Glu63^Oε2, Glu63^Oε1	Salt bridge
	Asn66^Nδ2a	Water-mediated H-bond
	Asn66^Oδ1b	Water-mediated H-bond
Lys^O	Tyr159^OH	H-bond
Leu2
Leu	Tyr7, Met45, Glu63, Asn66^b, Thr67, Tyr159	vdW
Leu^N	Glu63^Oε2	H-bond
Leu^O	Glu63^Oε1	Water-mediated H-bond
	Asn66^Nδ2a	Water-mediated H-bond
Pro3
Pro	Asn66^b, Ile99^a, Arg156, Tyr159	vdW
Pro^O	Asn66^Oδ1b	H-bond
Ala4
Ala	Asn66	vdW
Gln5
Gln	Gln155, Arg156	vdW
Gln^Nε2	Gln155^Oε1a	H-bond
Gln^O	Arg156^NH1	H-bond
	Arg156^NH2	H-bond
Phe6
Phe	Asn66, His70, Trp97, Arg156	vdW
Tyr7
Tyr	Thr73, Asn77, Val152, Gln155, Arg156	vdW
Tyr^N	Tyr116^OH	Water-mediated H-bond
	Arg156^NH2	Water-mediated H-bond
Tyr^OH	Gln155^Oε1	H-bond
	Arg156^NH1	Water-mediated H-bond
Tyr^O	Asp74^Oδ1	Water-mediated H-bond
	Asn77^Nδ2	H-bond
Ile8
Ile	Asn77, Lys146	vdW
Leu9
Leu	Asn77, Thr80, Tyr84, Tyr116, Ser143, Lys146	vdW
Leu^N	Asn77^Oδ1	H-bond
Leu^O	Tyr84^OH	H-bond
	Ser143^Oγ	H-bond
Leu^OXT	Lys146^Nζ	H-bond
	Asn77^Oδ1	Water-mediated H-bond
	Thr80^Oγ1	Water-mediated H-bond

^a

In molecule 1, not in molecule 2.

^b

In molecule 2, not in molecule 1.