Table 5.

Pairwise differentiation among the various rhesus and longtail populations based on 830 shared SNPs. The ChiW haplogroup consists of three haplotypes: ChiW1, CHiW2 and ChiW3 [32].

	CPRC	LABS	UM	ONPRC	WNPRC	Guangdong	Sichuan	Suzchou	Indon.	Maur.	Philip.	P. Malay.
CPRC rhesus (Ind1)
LABS rhesus (Ind1)	0.05
UM rhesus (Ind1)	0.06	-0.01
ONPRC (Ind2)	0.08	-0.07	0.01
WNPRC (Ind1, Ind2)	0.05	-0.01	0.02	0.02
Guangdong, China rhesus (ChiW, CNPRC, TSS)	0.25	0.24	0.21	0.13	0.22
Sichuan, China rhesus (ChiW, CNPRC, TSS)	0.25	0.2	0.21	0.12	0.21	0.01
Suzchou, China rhesus (ChiE, CNPRC, TSS)	0.25	0.22	0.21	0.12	0.21	0.01	0.02
Indonesian longtail (CNPRC)	0.54	0.73	0.57	0.57	0.57	0.63	0.58	0.6
Mauritius longtail (COVANCE)	0.57	0.79	0.65	0.67	0.65	0.7	0.62	0.65	0.07
Philippine longtail (New Iberia)	0.58	0.79	0.65	0.67	0.65	0.7	0.63	0.65	0.13	0.25
Peninsular Malaysia longtail (National University of Singapore)	0.54	0.73	0.59	0.6	0.59	0.65	0.59	0.61	0.01	0.13	0.24
Vietnamese longtail (Primate Products)	0.51	0.6	0.54	0.52	0.53	0.58	0.55	0.57	0.15	0.27	0.31	0.15