Table 2.
Primers used in TNCL virus study
| Primer | Sequence (5'-3') | TNCL RNA segment | Position on viral genome* | Direction |
|---|---|---|---|---|
| Noda-R1-190F | gggaaccgagttacacgcgcattgc | 1 | 190..214 | > |
| Noda-R1-636R | ggtgaatggtgagtcagcatc | 1 | 616..636 | < |
| Noda-R1-1093F | caatctgtcaacgctaggcttatcgg | 1 | 1093..1188 | > |
| Noda-R1-1531R | ccgccctaagttgtagttgttgggacgg | 1 | 1504..1531 | < |
| Noda-R1-2368F | tgtaccgatgcgcttactccgttgatatcgg | 1 | 2368..2398 | > |
| Noda-R1-2933R | ccacgctgggtttctccagcagtgatgttacc | 1 | 2902..2933 | < |
| Noda-R2-269F | ggaatacctgatagatttgaaggcaaag | 2 | 269..296 | > |
| Noda-R2-810R | ggcaatgtttggataccctccaatatgtcg | 2 | 781..810 | < |
| Noda-D4 | acatccagatccgatcaagt | 2 | 491..510 | > |
| Noda-U4 | gccaggaatgttgcttgcaa | 2 | 1161..1180 | < |
| Primer | Sequence (5'-3') | gp64 | Position* | direction |
| C-177Fs | attttggacgctgagggc | 109139..109156 | < | |
| L-330Rs | cttgttgatgtgcgcatgcatcagctc | 108731..108757 | > | |