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. 2010 Jun 17;10:175. doi: 10.1186/1471-2180-10-175

Table 1.

Statistical importance of discriminating TTGE bands

CD patients vs Controls (PC1)
TTGE band § Active + Inactive (%) Control (%) VIP P value (a)

26 (E.coli) 92.1 20.0 2.023 < 0.0001

18 (P.distasonis) 86.8 20.0 1.867 < 0.0001

39 (P.distasonis) 89.5 20.0 1.847 0.0001

35 73.7 0.0 1.802 < 0.0001

1 (B.vulgatus) 89.5 20.0 1.755 0.001

13 57.9 0.0 1.580 0.000

15 63.2 0.0 1.535 0.001

29 60.5 0.0 1.516 0.001

3 52.6 0.0 1.311 0.003

6 60.5 0.0 1.194 0.010

22 52.6 10.0 1.151 0.007

16 39.5 0.0 1.024 0.018

Active CD patients vs Inactive CD patients (PC2)

TTGE band§ Active(%) Inactive(%) VIP P value(b)

8 (P.distasonis) 31.6 0.0 1.691 0.009

1 (B.vulgatus) 84.2 94.7 1.687 0.026

6 47.4 73.7 1.667 0.089

7 26.3 0.0 1.522 0.015

21 21.1 0.0 1.507 0.023

26 94.7 89.5 1.498 0.474

39 89.5 89.5 1.475 1.000

13 73.7 42.1 1.316 0.054

18 94.7 78.9 1.299 0.032

35 78.9 68.4 1.271 0.255

12 36.8 10.5 1.258 0.049

15 68.4 57.9 1.079 0.386

5 36.8 15.8 1.056 0.083

29 68.4 52.6 1.054 0.237

19 47.4 63.2 1.046 0.237

9 78.9 94.7 1.031 0.255

§ Bands were self numbered according to the order of appearance (top-bottom) on the TTGE gel and are listed in descending order of importance (VIP) in the PLS-DA model. Between parentheses are reported the species used in the gel marker that run parallel to specific TTGE bands.

(a) Mann-Whitney U-test, α = 0.05

(b) Wilcoxon signed rank test, α = 0.05